RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 TCEAL4Q96EI5 215 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 SHDQ96IW2 340 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 ZNF560Q96MR9 790 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 PYM1Q9BRP8 204 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 LRRC27Q9C0I9 530 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 TNMDQ9H2S6 317 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 OLFML3Q9NRN5 406 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 DSEQ9UL01 958 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 MAFFQ9ULX9 164 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 STYXL1Q9Y6J8 313 aa10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 MORC2Q9Y6X9 1032 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-212ENST00000573328 MTMR11A4FU01 709 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 GOLGA8IPA6NC78 632 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 GOLGA8JA6NMD2 632 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 PIRO00625 290 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 CYB561D2O14569 222 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 GFRA3O60609 400 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 CUTAO60888 179 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 PPP6R2O75170 966 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 PRPF6O94906 941 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 YEATS4O95619 227 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 LDHAP00338 332 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 DCNP07585 359 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 PAX3P23760 479 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 ADSSP30520 456 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 AMPD3Q01432 767 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 DUSP4Q13115 394 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 GPR17Q13304 367 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 SNW1Q13573 536 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 MYBPC2Q14324 1141 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 UBXN2BQ14CS0 331 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 ANGPT1Q15389 498 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 MLF2Q15773 248 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 SV2CQ496J9 727 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 SLC39A12Q504Y0 691 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 PRSS36Q5K4E3 855 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 BRSK2Q8IWQ3 736 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 EFCAB13Q8IY85 973 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 THEM5Q8N1Q8 247 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 DTWD2Q8NBA8 298 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 LEMD2Q8NC56 503 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 FAM200AQ8TCP9 573 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 TMEM209Q96SK2 561 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 SEPT5Q99719 369 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 FOXQ1Q9C009 403 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 CUEDC2Q9H467 287 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 PCIF1Q9H4Z3 704 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 TMEM206Q9H813 350 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 AVENQ9NQS1 362 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 RBAKQ9NYW8 714 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 CEP72Q9P209 647 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 SIT1Q9Y3P8 196 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 R3HCC1Q9Y3T6 440 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 MYO15AQ9UKN7 3530 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 FANCMQ8IYD8 2048 aa10.43□□□□□ -0.74
NPLOC4-212ENST00000573328 COL4A2P08572 1712 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 ANO9A1A5B4 782 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 FRMD3A2A2Y4 597 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 SPTLC1O15269 473 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 ECI2O75521 394 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 F13A1P00488 732 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 ITGB3P05106 788 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 KRT19P08727 400 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 TMEM191BP0C7N4 346 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 ZSCAN22P10073 491 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 GJA1P17302 382 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 GARTP22102 1010 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 POLR2BP30876 1174 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 CCR2P41597 374 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 ME1P48163 572 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 CDR1P51861 262 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 POU5F1Q01860 360 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 GRM2Q14416 872 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 VEPH1Q14D04 833 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 TAF12Q16514 161 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 MGAT5BQ3V5L5 792 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 TANGO2Q6ICL3 276 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 PHLDB3Q6NSJ2 640 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 CRELD2Q6UXH1 353 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 TPRG1Q6ZUI0 275 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 NT5DC4Q86YG4 428 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 IQUBQ8NA54 791 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 ATAD1Q8NBU5 361 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 ZSWIM2Q8NEG5 633 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 PJA1Q8NG27 643 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 KCNG4Q8TDN1 519 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 CACTINQ8WUQ7 758 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 ELSPBP1Q96BH3 223 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 CBWD1Q9BRT8 395 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 STRA6Q9BX79 667 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 FGFBP2Q9BYJ0 223 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 BRD9Q9H8M2 597 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 ZFP14Q9HCL3 533 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 SLC27A5Q9Y2P5 690 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 MYH10P35580 1976 aa10.42□□□□□ -0.74
NPLOC4-212ENST00000573328 A0A1W2PRU2 124 aa10.41□□□□□ -0.74
NPLOC4-212ENST00000573328 KPNA7A9QM74 516 aa10.41□□□□□ -0.74
NPLOC4-212ENST00000573328 POLR2DO15514 142 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms