RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 TMEM120AQ9BXJ8 343 aa17.75■□□□□ 0.43
LITAF-209ENST00000571688 VPS11Q9H270 941 aa17.75■□□□□ 0.43
LITAF-209ENST00000571688 MANSC1Q9H8J5 431 aa17.75■□□□□ 0.43
LITAF-209ENST00000571688 BMP3P12645 472 aa17.75■□□□□ 0.43
LITAF-209ENST00000571688 TPH2Q8IWU9 490 aa17.75■□□□□ 0.43
LITAF-209ENST00000571688 PPM1KQ8N3J5 372 aa17.75■□□□□ 0.43
LITAF-209ENST00000571688 CYP2W1Q8TAV3 490 aa17.75■□□□□ 0.43
LITAF-209ENST00000571688 PLEKHO2Q8TD55 490 aa17.75■□□□□ 0.43
LITAF-209ENST00000571688 DYDC2Q96IM9 177 aa17.75■□□□□ 0.43
LITAF-209ENST00000571688 OLFM3Q96PB7 478 aa17.75■□□□□ 0.43
LITAF-209ENST00000571688 PMM2O15305 246 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 TM9SF1O15321 606 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 TGDSO95455 350 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 ZBTB16Q05516 673 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 USP4Q13107 963 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 MARK2Q7KZI7 788 aaKnown RBP17.74■□□□□ 0.43
LITAF-209ENST00000571688 GSTA5Q7RTV2 222 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 LCA5Q86VQ0 697 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 MRRFQ96E11 262 aaKnown RBP17.74■□□□□ 0.43
LITAF-209ENST00000571688 TSSK1BQ9BXA7 367 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 ADAM33Q9BZ11 813 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 PHACTR1Q9C0D0 580 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 TMEM117Q9H0C3 514 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 PCIF1Q9H4Z3 704 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 DNAJB4Q9UDY4 337 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 ALOX15BO15296 676 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 IMPDH2P12268 514 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 MXI1P50539 228 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 MFAP3P55082 362 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 MYBPC3Q14896 1274 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 CLEC16AQ2KHT3 1053 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 HP1BP3Q5SSJ5 553 aaPredicted RBP17.74■□□□□ 0.43
LITAF-209ENST00000571688 DPY19L2Q6NUT2 758 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 CAPN12Q6ZSI9 719 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 GLIS1Q8NBF1 620 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 TCP10LQ8TDR4 215 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 FAM161BQ96MY7 647 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 FNBP1Q96RU3 617 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 AVENQ9NQS1 362 aaPredicted RBP17.74■□□□□ 0.43
LITAF-209ENST00000571688 RPS6KL1Q9Y6S9 549 aa17.74■□□□□ 0.43
LITAF-209ENST00000571688 SH3BGRP55822 239 aaPredicted RBP17.73■□□□□ 0.43
LITAF-209ENST00000571688 NET1Q7Z628 596 aaPredicted RBP17.73■□□□□ 0.43
LITAF-209ENST00000571688 TTC7BQ86TV6 843 aa17.73■□□□□ 0.43
LITAF-209ENST00000571688 LRRC6Q86X45 466 aa17.73■□□□□ 0.43
LITAF-209ENST00000571688 MYLK4Q86YV6 388 aaPredicted RBP17.73■□□□□ 0.43
LITAF-209ENST00000571688 CCDC24Q8N4L8 307 aa17.73■□□□□ 0.43
LITAF-209ENST00000571688 TMEM174Q8WUU8 243 aa17.73■□□□□ 0.43
LITAF-209ENST00000571688 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
LITAF-209ENST00000571688 GPR101Q96P66 508 aaPredicted RBP17.73■□□□□ 0.43
LITAF-209ENST00000571688 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.73■□□□□ 0.43
LITAF-209ENST00000571688 NFASCO94856 1347 aa17.73■□□□□ 0.43
LITAF-209ENST00000571688 FOSP01100 380 aaPredicted RBP17.73■□□□□ 0.43
LITAF-209ENST00000571688 DLDP09622 509 aaKnown RBP17.73■□□□□ 0.43
LITAF-209ENST00000571688 GEMIN4P57678 1058 aaKnown RBP17.73■□□□□ 0.43
LITAF-209ENST00000571688 CDC16Q13042 620 aa17.73■□□□□ 0.43
LITAF-209ENST00000571688 DLGAP5Q15398 846 aa17.73■□□□□ 0.43
LITAF-209ENST00000571688 SEPT7Q16181 437 aaKnown RBP17.73■□□□□ 0.43
LITAF-209ENST00000571688 FHDC1Q9C0D6 1143 aaPredicted RBP17.73■□□□□ 0.43
LITAF-209ENST00000571688 FETUBQ9UGM5 382 aa17.73■□□□□ 0.43
LITAF-209ENST00000571688 TISP43B9A030 160 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 RNASEH1O60930 286 aaKnown RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 PABPC4LP0CB38 370 aaKnown RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 C15orf52Q6ZUT6 534 aaKnown RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 OTOP1Q7RTM1 612 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 RBM12BQ8IXT5 1001 aaKnown RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 ZBED8Q8IZ13 594 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 CCDC110Q8TBZ0 833 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 MZB1Q8WU39 189 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 FAM81BQ96LP2 452 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 KCND2Q9NZV8 630 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 SLC17A7Q9P2U7 560 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 ZNF536O15090 1300 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 FCHO1O14526 889 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 PSTPIP1O43586 416 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 SPATA31D3P0C874 917 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 PICALMQ13492 652 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 HNRNPDQ14103 355 aaKnown RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 TRMT5Q32P41 509 aaKnown RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 SPATA31D4Q6ZUB0 917 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 RFX8Q6ZV50 586 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 TMPRSS6Q8IU80 811 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 C12orf56Q8IXR9 622 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 ST13P4Q8IZP2 240 aaPredicted RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 BANPQ8N9N5 519 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 OXNAD1Q96HP4 312 aaPredicted RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 MIS12Q9H081 205 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 RANBP17Q9H2T7 1088 aaKnown RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 C12orf65Q9H3J6 166 aaKnown RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 NDE1Q9NXR1 346 aa17.72■□□□□ 0.43
LITAF-209ENST00000571688 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.72■□□□□ 0.43
LITAF-209ENST00000571688 PIM1P11309 404 aaPredicted RBP17.71■□□□□ 0.43
LITAF-209ENST00000571688 ETS2P15036 469 aa17.71■□□□□ 0.43
LITAF-209ENST00000571688 SHMT1P34896 483 aa17.71■□□□□ 0.43
LITAF-209ENST00000571688 GPX6P59796 221 aa17.71■□□□□ 0.43
LITAF-209ENST00000571688 MORF4L2Q15014 288 aa17.71■□□□□ 0.43
LITAF-209ENST00000571688 ACAD11Q709F0 780 aa17.71■□□□□ 0.43
LITAF-209ENST00000571688 SLF2Q8IX21 1173 aa17.71■□□□□ 0.43
LITAF-209ENST00000571688 KATNAL2Q8IYT4 538 aa17.71■□□□□ 0.43
LITAF-209ENST00000571688 MCOLN2Q8IZK6 566 aa17.71■□□□□ 0.43
LITAF-209ENST00000571688 SEMA4DQ92854 862 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms