RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 WDFY4Q6ZS81 3184 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 KANSL1LA0AUZ9 987 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 PPP6R2O75170 966 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 PPP1R37O75864 691 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 YEATS4O95619 227 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 CYP11A1P05108 521 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 NFICP08651 508 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 ACOT2P49753 483 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 EPHA5P54756 1037 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 GPC5P78333 572 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 CEBPZQ03701 1054 aaKnown RBP10.54□□□□□ -0.72
CIITA-207ENST00000571545 SPAG1Q07617 926 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 VEPH1Q14D04 833 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 ZC2HC1CQ53FD0 456 aaPredicted RBP10.54□□□□□ -0.72
CIITA-207ENST00000571545 PRSS36Q5K4E3 855 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 SPECC1Q5M775 1068 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 SLC39A4Q6P5W5 647 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 SYCP3Q8IZU3 236 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 LRRC15Q8TF66 581 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 CACTINQ8WUQ7 758 aaKnown RBP10.54□□□□□ -0.72
CIITA-207ENST00000571545 NKD2Q969F2 451 aaPredicted RBP10.54□□□□□ -0.72
CIITA-207ENST00000571545 SNX21Q969T3 373 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 MSANTD3Q96H12 275 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 USP28Q96RU2 1077 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 PYM1Q9BRP8 204 aaKnown RBP10.54□□□□□ -0.72
CIITA-207ENST00000571545 IER2Q9BTL4 223 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 BCO2Q9BYV7 579 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 SLITRK6Q9H5Y7 841 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 FAM86C1Q9NVL1 165 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 MTMR6Q9Y217 621 aa10.54□□□□□ -0.72
CIITA-207ENST00000571545 R3HCC1Q9Y3T6 440 aaKnown RBP10.54□□□□□ -0.72
CIITA-207ENST00000571545 ANO9A1A5B4 782 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 FRMD3A2A2Y4 597 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 MYMKA6NI61 221 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 PIRO00625 290 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 MAN2B1O00754 1011 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 SPTLC2O15270 562 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 SEC24AO95486 1093 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 CEBPBP17676 345 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 IGFBP6P24592 240 aaPredicted RBP10.53□□□□□ -0.72
CIITA-207ENST00000571545 TUFMP49411 452 aaKnown RBP10.53□□□□□ -0.72
CIITA-207ENST00000571545 SLC5A9Q2M3M2 681 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 SLC44A4Q53GD3 710 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 ARHGAP15Q53QZ3 475 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 ZBTB41Q5SVQ8 909 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 ATL3Q6DD88 541 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 ZNF852Q6ZMS4 543 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 USP49Q70CQ1 688 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 BRSK2Q8IWQ3 736 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 LINC00301Q8NCQ3 95 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 SPATA18Q8TC71 538 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 SPPL2BQ8TCT7 592 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 SMARCD2Q92925 531 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 IRF7Q92985 503 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 DNAJC19Q96DA6 116 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 MCRS1Q96EZ8 462 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 SENP8Q96LD8 212 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 ASB16Q96NS5 453 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 GCNAQ96QF7 691 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 KXD1Q9BQD3 176 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 DDX23Q9BUQ8 820 aaKnown RBP10.53□□□□□ -0.72
CIITA-207ENST00000571545 STRA6Q9BX79 667 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 TRPV4Q9HBA0 871 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 PANK4Q9NVE7 773 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 DPP3Q9NY33 737 aa10.53□□□□□ -0.72
CIITA-207ENST00000571545 NUP210Q8TEM1 1887 aaPredicted RBP10.53□□□□□ -0.72
CIITA-207ENST00000571545 SCN1AP35498 2009 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 MTMR11A4FU01 709 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 ANKRD63C9JTQ0 380 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 PI15O43692 258 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 CUTAO60888 179 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 MYL4P12829 197 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 GLULP15104 373 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 PSMC3P17980 439 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 CDC25CP30307 473 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 SNW1Q13573 536 aaKnown RBP10.52□□□□□ -0.73
CIITA-207ENST00000571545 PPP2R5DQ14738 602 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 UBXN2BQ14CS0 331 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 SURF1Q15526 300 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 TPRG1Q6ZUI0 275 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 C1orf210Q8IVY1 113 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 DCP1BQ8IZD4 617 aaKnown RBP10.52□□□□□ -0.73
CIITA-207ENST00000571545 LRRC52Q8N7C0 313 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 IQUBQ8NA54 791 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 KCNG4Q8TDN1 519 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 PSMG2Q969U7 264 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 CLIC6Q96NY7 704 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 TRMT61BQ9BVS5 477 aaKnown RBP10.52□□□□□ -0.73
CIITA-207ENST00000571545 BRD9Q9H8M2 597 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 KIAA1586Q9HCI6 787 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 TRPV5Q9NQA5 729 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 RBAKQ9NYW8 714 aaPredicted RBP10.52□□□□□ -0.73
CIITA-207ENST00000571545 CEP72Q9P209 647 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 ITGA11Q9UKX5 1188 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 TIMM13Q9Y5L4 95 aaPredicted RBP10.52□□□□□ -0.73
CIITA-207ENST00000571545 UBE4BO95155 1302 aa10.52□□□□□ -0.73
CIITA-207ENST00000571545 PATJQ8NI35 1801 aa10.51□□□□□ -0.73
CIITA-207ENST00000571545 PRR23AA6NEV1 266 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms