RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	19.38	■□□□□ 0.69
PKD1-238	ENST00000570150	NCOR1	O75376	2440 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	TCHH	Q07283	1943 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	BICDL2	A1A5D9	508 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	CYB561D2	O14569	222 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	TBC1D4	O60343	1298 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	ABLIM3	O94929	683 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	P4HA1	P13674	534 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	POLR2B	P30876	1174 aa	Known RBP	19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	SSTR3	P32745	418 aa	Predicted RBP	19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	LHX1	P48742	406 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	CLDN10	P78369	228 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	ADAM9	Q13443	819 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	RARS2	Q5T160	578 aa	Known RBP	19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	OTOP3	Q7RTS5	596 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	TCEAL8	Q8IYN2	117 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	GJD3	Q8N144	294 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	TOP6BL	Q8N6T0	577 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	C1orf127	Q8N9H9	656 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	RDH13	Q8NBN7	331 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	SYAP1	Q96A49	352 aa	Predicted RBP	19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	PRKD2	Q9BZL6	878 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	MTMR12	Q9C0I1	747 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	IKZF4	Q9H2S9	585 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	AFF4	Q9UHB7	1163 aa	Known RBP	19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	FBXL5	Q9UKA1	691 aa		19.37	■□□□□ 0.69
PKD1-238	ENST00000570150	CCDC195	A0A1B0GUA6	201 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150		I3L4J1	428 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	PRRG1	O14668	218 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	PHACTR2	O75167	634 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	STAU1	O95793	577 aa	Known RBP	19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	CPB1	P15086	417 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	IL9	P15248	144 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	RPL17	P18621	184 aa	Known RBP	19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	FKBP3	Q00688	224 aa	Known RBP	19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	ZP2	Q05996	745 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	CEP135	Q66GS9	1140 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	TRAPPC11	Q7Z392	1133 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	DCP1B	Q8IZD4	617 aa	Known RBP	19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	LEMD2	Q8NC56	503 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	TAF4B	Q92750	862 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	CCDC127	Q96BQ5	260 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	HPDL	Q96IR7	371 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	MYO7A	Q13402	2215 aa		19.36	■□□□□ 0.69
PKD1-238	ENST00000570150	C19orf67	A6NJJ6	358 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	FGFR1OP	O95684	399 aa	Known RBP	19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	LRG1	P02750	347 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	C8A	P07357	584 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	EPB41	P11171	864 aa	Known RBP	19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	ALAD	P13716	330 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	PRKCSH	P14314	528 aa	Predicted RBP	19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	PCSK1	P29120	753 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	GTF2H1	P32780	548 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	MYL7	Q01449	175 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	TSPY1	Q01534	308 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	ROR1	Q01973	937 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	GPR17	Q13304	367 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	CENPP	Q6IPU0	288 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	TMC5	Q6UXY8	1006 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	GLYCTK	Q8IVS8	523 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	CCDC150	Q8NCX0	1101 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	PARD3B	Q8TEW8	1205 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	SMG7	Q92540	1137 aa	Known RBP	19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	IMPG2	Q9BZV3	1241 aa		19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	19.35	■□□□□ 0.69
PKD1-238	ENST00000570150	SLC16A3	O15427	465 aa	Known RBP	19.34	■□□□□ 0.69
PKD1-238	ENST00000570150	TUFM	P49411	452 aa	Known RBP	19.34	■□□□□ 0.69
PKD1-238	ENST00000570150	BFSP1	Q12934	665 aa		19.34	■□□□□ 0.69
PKD1-238	ENST00000570150	MAPRE1	Q15691	268 aa	Known RBP	19.34	■□□□□ 0.69
PKD1-238	ENST00000570150	NFE2	Q16621	373 aa	Predicted RBP	19.34	■□□□□ 0.69
PKD1-238	ENST00000570150	FAM186B	Q8IYM0	893 aa		19.34	■□□□□ 0.69
PKD1-238	ENST00000570150	ADSSL1	Q8N142	457 aa		19.34	■□□□□ 0.69
PKD1-238	ENST00000570150	WDR6	Q9NNW5	1121 aa	Known RBP	19.34	■□□□□ 0.69
PKD1-238	ENST00000570150	PRCP	P42785	496 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	GUCY2F	P51841	1108 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	TNNC1	P63316	161 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	RBM10	P98175	930 aa	Known RBP	19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	BIRC3	Q13489	604 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	ZCWPW2	Q504Y3	356 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	IQCE	Q6IPM2	695 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	TDRD5	Q8NAT2	981 aa	Known RBP	19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	SLC7A14	Q8TBB6	771 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	FAXDC2	Q96IV6	333 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	ACBD6	Q9BR61	282 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	VRTN	Q9H8Y1	702 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	METTL14	Q9HCE5	456 aa	Known RBP	19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	MAPK8IP1	Q9UQF2	711 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	ASB3	Q9Y575	518 aa		19.33	■□□□□ 0.68
PKD1-238	ENST00000570150	ATG2A	Q2TAZ0	1938 aa		19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	LOC730098	B7Z3J9	87 aa		19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	GADD45B	O75293	160 aa	Predicted RBP	19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	FGF19	O95750	216 aa		19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	GNA14	O95837	355 aa		19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	VAMP7	P51809	220 aa		19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	ARPP19	P56211	112 aa		19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	SGSM1	Q2NKQ1	1148 aa		19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	ZSWIM2	Q8NEG5	633 aa		19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	SPPL2B	Q8TCT7	592 aa		19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	NXPE3	Q969Y0	559 aa		19.32	■□□□□ 0.68
PKD1-238	ENST00000570150	CEP63	Q96MT8	703 aa		19.32	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms