RNA–Protein interactions for RNA: ENST00000569095.1

CDH11-215, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-215ENST00000569095 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
CDH11-215ENST00000569095 HMGXB3Q12766 1538 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 A0A087X1B8 175 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 ZNF185O15231 689 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 TBC1D4O60343 1298 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 PQBP1O60828 265 aaKnown RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 MAP4K4O95819 1239 aaPredicted RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 HRGP04196 525 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 RARBP10826 455 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 ZNF135P52742 658 aaPredicted RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 PURAQ00577 322 aaKnown RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 ZNF844Q08AG5 666 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 TOB2Q14106 344 aaPredicted RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 HABP2Q14520 560 aaPredicted RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 KIF22Q14807 665 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 SPDYE7PQ495Y7 208 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 AMOTQ4VCS5 1084 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 NOMO2Q5JPE7 1267 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 FAM102AQ5T9C2 384 aaPredicted RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 CCSAPQ6IQ19 270 aaPredicted RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 HTR3DQ70Z44 454 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 GDF7Q7Z4P5 450 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 USP37Q86T82 979 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 COL23A1Q86Y22 540 aaPredicted RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 LDLRAD3Q86YD5 345 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 RHOT2Q8IXI1 618 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 SARGQ9BW04 601 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 LRRC27Q9C0I9 530 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 ZNF703Q9H7S9 590 aaPredicted RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 KIAA1586Q9HCI6 787 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 GPRC5BQ9NZH0 403 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 RNF181Q9P0P0 153 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 C11orf21Q9P2W6 132 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 CDYLQ9Y232 598 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 MTO1Q9Y2Z2 717 aaKnown RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 WDR33Q9C0J8 1336 aaKnown RBP4.1□□□□□ -1.75
CDH11-215ENST00000569095 AATKQ6ZMQ8 1374 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 SMARCA2P51531 1590 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 SMARCA4P51532 1647 aa4.1□□□□□ -1.75
CDH11-215ENST00000569095 A0A1B0GTW7 788 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 M0QYG6 137 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 MYO1CO00159 1063 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 RNASET2O00584 256 aaKnown RBP4.09□□□□□ -1.75
CDH11-215ENST00000569095 TRIM24O15164 1050 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 MATN4O95460 622 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 GPANK1O95872 356 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 HLA-DOAP06340 250 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 TRIM27P14373 513 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 BRAFP15056 766 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 ZKSCAN1P17029 563 aaPredicted RBP4.09□□□□□ -1.75
CDH11-215ENST00000569095 GCSHP23434 173 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 PEX2P28328 305 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 PTTG1IPP53801 180 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 PIGFQ07326 219 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 DPTQ07507 201 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 PDCD4Q53EL6 469 aaKnown RBP4.09□□□□□ -1.75
CDH11-215ENST00000569095 AGAP9Q5VTM2 703 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 SLC30A10Q6XR72 485 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 FAM43AQ8N2R8 423 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 CELF5Q8N6W0 485 aaKnown RBP4.09□□□□□ -1.75
CDH11-215ENST00000569095 TMIEQ8NEW7 156 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 PJA1Q8NG27 643 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 OR56A1Q8NGH5 318 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 OR6B3Q8NGW1 331 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 IL31RAQ8NI17 732 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 DDX17Q92841 729 aaKnown RBP4.09□□□□□ -1.75
CDH11-215ENST00000569095 SCAMP4Q969E2 229 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 KLHL32Q96NJ5 620 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 P2RX7Q99572 595 aaKnown RBP4.09□□□□□ -1.75
CDH11-215ENST00000569095 SMOQ99835 787 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 ZSWIM1Q9BR11 485 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 TTPALQ9BTX7 342 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 APOL5Q9BWW9 433 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 BHMT2Q9H2M3 363 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 RNPEPQ9H4A4 650 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 ARNT2Q9HBZ2 717 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 DDX21Q9NR30 783 aaKnown RBP eCLIP4.09□□□□□ -1.75
CDH11-215ENST00000569095 KLHL11Q9NVR0 708 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.09□□□□□ -1.75
CDH11-215ENST00000569095 OGDHLQ9ULD0 1010 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 NOX1Q9Y5S8 564 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 SNX13Q9Y5W8 968 aa4.09□□□□□ -1.75
CDH11-215ENST00000569095 POLR2AP24928 1970 aaKnown RBP4.09□□□□□ -1.76
CDH11-215ENST00000569095 PRSS29PA6NIE9 313 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 AHRRA9YTQ3 701 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 POLRMTO00411 1230 aaKnown RBP4.08□□□□□ -1.76
CDH11-215ENST00000569095 VPS4BO75351 444 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 USP19O94966 1318 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 CHEK2O96017 543 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 MYF5P13349 255 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 PHKG2P15735 406 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 INHBCP55103 352 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 SUMO3P55854 103 aaPredicted RBP4.08□□□□□ -1.76
CDH11-215ENST00000569095 HSD11B2P80365 405 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 PICALMQ13492 652 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 SEMA5AQ13591 1074 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 GALEQ14376 348 aa4.08□□□□□ -1.76
CDH11-215ENST00000569095 POLD3Q15054 466 aaPredicted RBP4.08□□□□□ -1.76
CDH11-215ENST00000569095 MAP9Q49MG5 647 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms