RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 RAP1GAPP47736 663 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 TAF6P49848 677 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 GALCP54803 685 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 CDH8P55286 799 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 SOX4Q06945 474 aaPredicted RBP13.46□□□□□ -0.25
GGA2-213ENST00000568922 SV2CQ496J9 727 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 ZNF598Q86UK7 904 aaKnown RBP13.46□□□□□ -0.25
GGA2-213ENST00000568922 PALB2Q86YC2 1186 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 SLC35F6Q8N357 371 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 APBB2Q92870 758 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 MMS19Q96T76 1030 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 PDCL3Q9H2J4 239 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 SCN1AP35498 2009 aa13.46□□□□□ -0.25
GGA2-213ENST00000568922 A0A0A6YYK5 440 aaPredicted RBP13.46□□□□□ -0.26
GGA2-213ENST00000568922 PPEF2O14830 753 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 THAP12O43422 761 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 NBNO60934 754 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 CILPO75339 1184 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 FTLP02792 175 aaPredicted RBP13.46□□□□□ -0.26
GGA2-213ENST00000568922 FAM189BP81408 668 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 INCA1Q0VD86 236 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 FAAP100Q0VG06 881 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 IFI16Q16666 785 aaKnown RBP13.46□□□□□ -0.26
GGA2-213ENST00000568922 CLEC16AQ2KHT3 1053 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 TRIM60Q495X7 471 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 PLEKHG4Q58EX7 1191 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 PPP1R2P3Q6NXS1 205 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 RTN4RL1Q86UN2 441 aaPredicted RBP13.46□□□□□ -0.26
GGA2-213ENST00000568922 RNF169Q8NCN4 708 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 TRIM58Q8NG06 486 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 ZNF606Q8WXB4 792 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 CTNNBL1Q8WYA6 563 aaPredicted RBP13.46□□□□□ -0.26
GGA2-213ENST00000568922 SEPT8Q92599 483 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 NOX5Q96PH1 765 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 ALS2CR12Q96Q35 445 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 TSPYL2Q9H2G4 693 aaPredicted RBP13.46□□□□□ -0.26
GGA2-213ENST00000568922 HIPK3Q9H422 1215 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 GDAP2Q9NXN4 497 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 TAS2R14Q9NYV8 317 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 PUF60Q9UHX1 559 aaKnown RBP13.46□□□□□ -0.26
GGA2-213ENST00000568922 BARX2Q9UMQ3 279 aaPredicted RBP13.46□□□□□ -0.26
GGA2-213ENST00000568922 SNX9Q9Y5X1 595 aa13.46□□□□□ -0.26
GGA2-213ENST00000568922 KPNA7A9QM74 516 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 INPPL1O15357 1258 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 SCNN1GP51170 649 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 TLE2Q04725 743 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 GRIK3Q13003 919 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 ZNF394Q53GI3 561 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 ACAD10Q6JQN1 1059 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 DIS3LQ8TF46 1054 aaKnown RBP13.45□□□□□ -0.26
GGA2-213ENST00000568922 LINC01599Q8WXQ3 324 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 C11orf49Q9H6J7 331 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 GOLGA2P5Q9HBQ8 144 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 MIOSQ9NXC5 875 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 NCANO14594 1321 aa13.45□□□□□ -0.26
GGA2-213ENST00000568922 MED7O43513 233 aa13.44□□□□□ -0.26
GGA2-213ENST00000568922 MOCS3O95396 460 aa13.44□□□□□ -0.26
GGA2-213ENST00000568922 CALCAP01258 141 aa13.44□□□□□ -0.26
GGA2-213ENST00000568922 CYP1A1P04798 512 aaPredicted RBP13.44□□□□□ -0.26
GGA2-213ENST00000568922 UNGP13051 313 aaPredicted RBP13.44□□□□□ -0.26
GGA2-213ENST00000568922 RPL9P32969 192 aaKnown RBP13.44□□□□□ -0.26
GGA2-213ENST00000568922 RAD23BP54727 409 aa13.44□□□□□ -0.26
GGA2-213ENST00000568922 NAP1L1P55209 391 aaKnown RBP13.44□□□□□ -0.26
GGA2-213ENST00000568922 GPNMBQ14956 572 aa13.44□□□□□ -0.26
GGA2-213ENST00000568922 DBF4BQ8NFT6 615 aa13.44□□□□□ -0.26
GGA2-213ENST00000568922 WHAMMQ8TF30 809 aa13.44□□□□□ -0.26
GGA2-213ENST00000568922 TMEM176AQ96HP8 235 aa13.44□□□□□ -0.26
GGA2-213ENST00000568922 CALR3Q96L12 384 aaKnown RBP13.44□□□□□ -0.26
GGA2-213ENST00000568922 SALL4Q9UJQ4 1053 aa13.44□□□□□ -0.26
GGA2-213ENST00000568922 CTAGE9A4FU28 777 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 FANCGO15287 622 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 LILRA4P59901 499 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 GPC5P78333 572 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 DPH6Q7L8W6 267 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 DNAAF5Q86Y56 855 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 SLC4A11Q8NBS3 891 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 RFFLQ8WZ73 363 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 DDX27Q96GQ7 796 aaKnown RBP13.43□□□□□ -0.26
GGA2-213ENST00000568922 NAPGQ99747 312 aaPredicted RBP13.43□□□□□ -0.26
GGA2-213ENST00000568922 TMEM106CQ9BVX2 250 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 ELAC1Q9H777 363 aaKnown RBP13.43□□□□□ -0.26
GGA2-213ENST00000568922 KIAA1257Q9ULG3 409 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 PCDHGC3Q9UN70 934 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 BUB1O43683 1085 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 LSM8O95777 96 aaKnown RBP13.43□□□□□ -0.26
GGA2-213ENST00000568922 CXCL10P02778 98 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 FAM163BP0C2L3 166 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 VDRP11473 427 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 ABCB4P21439 1286 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 IBSPP21815 317 aaPredicted RBP13.43□□□□□ -0.26
GGA2-213ENST00000568922 PAX3P23760 479 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 BRD2P25440 801 aaKnown RBP13.43□□□□□ -0.26
GGA2-213ENST00000568922 AFF1P51825 1210 aaKnown RBP13.43□□□□□ -0.26
GGA2-213ENST00000568922 NDST1P52848 882 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 CENPCQ03188 943 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 TCEAL1Q15170 157 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 GLB1LQ6UWU2 654 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 UNC93AQ86WB7 457 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 RHOT2Q8IXI1 618 aa13.43□□□□□ -0.26
GGA2-213ENST00000568922 TRIM11Q96F44 468 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms