RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ZNF667Q5HYK9 610 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 PLPP4Q5VZY2 271 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 GPR65Q8IYL9 337 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 TOP6BLQ8N6T0 577 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 MRPL43Q8N983 215 aaKnown RBP17.98■□□□□ 0.47
COMMD4-224ENST00000568877 AUTS2Q8WXX7 1259 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 RIN2Q8WYP3 895 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-224ENST00000568877 ELMO3Q96BJ8 720 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 GAS2L1Q99501 681 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-224ENST00000568877 NXF1Q9UBU9 619 aaKnown RBP17.98■□□□□ 0.47
COMMD4-224ENST00000568877 DSEQ9UL01 958 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 TIMM13Q9Y5L4 95 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-224ENST00000568877 COL4A4P53420 1690 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-224ENST00000568877 PES1O00541 588 aaKnown RBP17.97■□□□□ 0.47
COMMD4-224ENST00000568877 C2CD2LO14523 706 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 HUS1O60921 280 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 LRRN2O75325 713 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 CYP11A1P05108 521 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 POU3F3P20264 500 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-224ENST00000568877 CA8P35219 290 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 COPB1P53618 953 aaKnown RBP17.97■□□□□ 0.47
COMMD4-224ENST00000568877 MRPL58Q14197 206 aaKnown RBP17.97■□□□□ 0.47
COMMD4-224ENST00000568877 PTPN14Q15678 1187 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 WDR44Q5JSH3 913 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 VARS2Q5ST30 1063 aaKnown RBP17.97■□□□□ 0.47
COMMD4-224ENST00000568877 SPOPLQ6IQ16 392 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 PDXDC1Q6P996 788 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 DPH6Q7L8W6 267 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 LNX1Q8TBB1 728 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-224ENST00000568877 PIK3R5Q8WYR1 880 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 MMS19Q96T76 1030 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 CDX2Q99626 313 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-224ENST00000568877 VPS16Q9H269 839 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 APOBEC3GQ9HC16 384 aaKnown RBP17.97■□□□□ 0.47
COMMD4-224ENST00000568877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.97■□□□□ 0.47
COMMD4-224ENST00000568877 MTMR10Q9NXD2 777 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 POLIQ9UNA4 740 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 PCDHGC5Q9Y5F6 944 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 IRAK3Q9Y616 596 aa17.97■□□□□ 0.47
COMMD4-224ENST00000568877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-224ENST00000568877 C2orf71A6NGG8 1288 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 HIDE1A8MVS5 230 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 OAZ2O95190 189 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 P4HA1P13674 534 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 IGFBP4P22692 258 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 NOP14P78316 857 aaKnown RBP17.96■□□□□ 0.47
COMMD4-224ENST00000568877 YWHAHQ04917 246 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-224ENST00000568877 PSMD5Q16401 504 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 SOWAHAQ2M3V2 549 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 WSCD1Q658N2 575 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 PRSS55Q6UWB4 352 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-224ENST00000568877 ANKS3Q6ZW76 656 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 APTXQ7Z2E3 356 aaKnown RBP17.96■□□□□ 0.47
COMMD4-224ENST00000568877 LIMS2Q7Z4I7 341 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 METTL23Q86XA0 190 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 PDCL2Q8N4E4 241 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 RNF214Q8ND24 703 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 EHBP1Q8NDI1 1231 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 LMO3Q8TAP4 145 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 GUCD1Q96NT3 240 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.96■□□□□ 0.47
COMMD4-224ENST00000568877 L1RE1Q9UN81 338 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 MTCH2Q9Y6C9 303 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 SCN1AP35498 2009 aa17.96■□□□□ 0.47
COMMD4-224ENST00000568877 CDH23Q9H251 3354 aa17.96■□□□□ 0.46
COMMD4-224ENST00000568877 GTPBP10A4D1E9 387 aaKnown RBP17.95■□□□□ 0.46
COMMD4-224ENST00000568877 H7C4K7 107 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 FAM163BP0C2L3 166 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 CREMQ03060 361 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 OVOS1Q6IE37 1185 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 GBP6Q6ZN66 633 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 TMEM86AQ8N2M4 240 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 MYLIPQ8WY64 445 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 CRACR2AQ9BSW2 395 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 EMILIN2Q9BXX0 1053 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 RXFP1Q9HBX9 757 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 MTRRQ9UBK8 725 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 BACE2Q9Y5Z0 518 aa17.95■□□□□ 0.46
COMMD4-224ENST00000568877 TRANK1O15050 2925 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 TACC1O75410 805 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 CNPP09543 421 aaKnown RBP17.94■□□□□ 0.46
COMMD4-224ENST00000568877 EXOC3L4Q17RC7 722 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 ZNF280DQ6N043 979 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 ADGRF2Q8IZF7 708 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 SPATA18Q8TC71 538 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 TATDN2Q93075 761 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 FAXDC2Q96IV6 333 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 OXCT2Q9BYC2 517 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-224ENST00000568877 NIF3L1Q9GZT8 377 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 INTS2Q9H0H0 1204 aaKnown RBP17.94■□□□□ 0.46
COMMD4-224ENST00000568877 NSUN3Q9H649 340 aaKnown RBP17.94■□□□□ 0.46
COMMD4-224ENST00000568877 SMYD3Q9H7B4 428 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 GCNT4Q9P109 453 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 FNIP2Q9P278 1114 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 SZT2Q5T011 3432 aa17.94■□□□□ 0.46
COMMD4-224ENST00000568877 LGALS16A8MUM7 142 aa17.93■□□□□ 0.46
COMMD4-224ENST00000568877 TBC1D4O60343 1298 aa17.93■□□□□ 0.46
COMMD4-224ENST00000568877 RPL17P18621 184 aaKnown RBP17.93■□□□□ 0.46
COMMD4-224ENST00000568877 SLC9A1P19634 815 aa17.93■□□□□ 0.46
COMMD4-224ENST00000568877 ASPAP45381 313 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms