RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ANKRD1Q15327 319 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 CSRP2Q16527 193 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 GPR158Q5T848 1215 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 N4BP2L1Q5TBK1 243 aaPredicted RBP16.2■□□□□ 0.18
USB1-214ENST00000568848 TCEAL6Q6IPX3 200 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 RINT1Q6NUQ1 792 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 CEP68Q76N32 757 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 SPEM1Q8N4L4 309 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 TCEAL3Q969E4 200 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 MMTAG2Q9BU76 263 aaKnown RBP16.2■□□□□ 0.18
USB1-214ENST00000568848 ATXN3LQ9H3M9 355 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 TRPV4Q9HBA0 871 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 TRPV5Q9NQA5 729 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 SPAG17Q6Q759 2223 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 IGF2RP11717 2491 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 MYH11P35749 1972 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 NUP210Q8TEM1 1887 aaPredicted RBP16.19■□□□□ 0.18
USB1-214ENST00000568848 MTMR11A4FU01 709 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 MICAL2O94851 1124 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 GABRR2P28476 465 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 MARCKSP29966 332 aaPredicted RBP16.19■□□□□ 0.18
USB1-214ENST00000568848 RPL9P32969 192 aaKnown RBP16.19■□□□□ 0.18
USB1-214ENST00000568848 FXR2P51116 673 aaKnown RBP eCLIP16.19■□□□□ 0.18
USB1-214ENST00000568848 YWHAHQ04917 246 aaPredicted RBP16.19■□□□□ 0.18
USB1-214ENST00000568848 HAUS3Q68CZ6 603 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 TRIM68Q6AZZ1 485 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 C1orf186Q6ZWK4 172 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 KBTBD6Q86V97 674 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 LONP2Q86WA8 852 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 BEST2Q8NFU1 509 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 OR10T2Q8NGX3 314 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 RIN3Q8TB24 985 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 CHFRQ96EP1 664 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 KIF12Q96FN5 646 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 TMEM134Q9H6X4 195 aa16.19■□□□□ 0.18
USB1-214ENST00000568848 ZFYVE26Q68DK2 2539 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 GREB1Q4ZG55 1949 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 MYBPHLA2RUH7 354 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 ANTXRLA6NF34 631 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 OTOL1A6NHN0 477 aaPredicted RBP16.18■□□□□ 0.18
USB1-214ENST00000568848 LACTBL1A8MY62 500 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 CHADO15335 359 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 SEC24BO95487 1268 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 NMT1P30419 496 aaKnown RBP16.18■□□□□ 0.18
USB1-214ENST00000568848 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.18
USB1-214ENST00000568848 FCHO2Q0JRZ9 810 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 PLD1Q13393 1074 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 NOLC1Q14978 699 aaKnown RBP eCLIP16.18■□□□□ 0.18
USB1-214ENST00000568848 SAFBQ15424 915 aaKnown RBP eCLIP16.18■□□□□ 0.18
USB1-214ENST00000568848 AASDHQ4L235 1098 aaPredicted RBP16.18■□□□□ 0.18
USB1-214ENST00000568848 DSTYKQ6XUX3 929 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 DNAJB7Q7Z6W7 309 aaPredicted RBP16.18■□□□□ 0.18
USB1-214ENST00000568848 APPL2Q8NEU8 664 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 GIPC2Q8TF65 315 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 PNMA5Q96PV4 448 aa16.18■□□□□ 0.18
USB1-214ENST00000568848 M0QZQ0 153 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 ATF6P18850 670 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 CCINQ13939 588 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 LRRC32Q14392 662 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 PPP2R5DQ14738 602 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 CENPPQ6IPU0 288 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 MAMSTRQ6ZN01 415 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 APBB1IPQ7Z5R6 666 aaPredicted RBP16.17■□□□□ 0.18
USB1-214ENST00000568848 TMEM161BQ8NDZ6 487 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 FAM84AQ96KN4 292 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 SEPT5Q99719 369 aaPredicted RBP16.17■□□□□ 0.18
USB1-214ENST00000568848 IKZF4Q9H2S9 585 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 FBRSL1Q9HCM7 1045 aaKnown RBP16.17■□□□□ 0.18
USB1-214ENST00000568848 CCL26Q9Y258 94 aa16.17■□□□□ 0.18
USB1-214ENST00000568848 SCN1AP35498 2009 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 TISP43B9A030 160 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 DCLK1O15075 740 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 OAZ2O95190 189 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 MAPTP10636 758 aaKnown RBP16.16■□□□□ 0.18
USB1-214ENST00000568848 GPR15P49685 360 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 EPHB3P54753 998 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 OVOS1Q6IE37 1185 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 FSTL4Q6MZW2 842 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 IGSF22Q8N9C0 903 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 FAM200AQ8TCP9 573 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 LRRC15Q8TF66 581 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 BORCS6Q96GS4 357 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 HHIPQ96QV1 700 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 IL21Q9HBE4 155 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 DNM3Q9UQ16 869 aa16.16■□□□□ 0.18
USB1-214ENST00000568848 TTC26A0AVF1 554 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 DPYSL4O14531 572 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 TOM1L1O75674 476 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 EGFP01133 1207 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
USB1-214ENST00000568848 NFICP08651 508 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 ARSAP15289 507 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 SPINK2P20155 84 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 AARSP49588 968 aaKnown RBP eCLIP16.15■□□□□ 0.18
USB1-214ENST00000568848 ANAPC15P60006 121 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
USB1-214ENST00000568848 ZBTB6Q15916 424 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 ENOX2Q16206 610 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms