RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TFR2Q9UP52 801 aa6.26□□□□□ -1.41
SF3B3-210ENST00000567654 REXO2Q9Y3B8 237 aaKnown RBP6.26□□□□□ -1.41
SF3B3-210ENST00000567654 SCN10AQ9Y5Y9 1956 aa6.26□□□□□ -1.41
SF3B3-210ENST00000567654 CETN3O15182 167 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 ARHGAP6O43182 974 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 STX10O60499 249 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 LRRN2O75325 713 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 FGFR1OPO95684 399 aaKnown RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 ADRB2P07550 413 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 PLEKP08567 350 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 ACTN1P12814 892 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 SLC9A1P19634 815 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 MARK3P27448 753 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 CTGFP29279 349 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 EIF4A3P38919 411 aaKnown RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 ADCYAP1R1P41586 468 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 NPTX2P47972 431 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 GCLCP48506 637 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 RACK1P63244 317 aaKnown RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 DLG4P78352 724 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 LMNB2Q03252 620 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 TRIM14Q14142 442 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 GRB14Q14449 540 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 EMC2Q15006 297 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 FAM110CQ1W6H9 321 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 XKR3Q5GH77 459 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 CELF3Q5SZQ8 465 aaKnown RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 C1orf220Q5T0J3 134 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 HAUS6Q7Z4H7 955 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 FRMD5Q7Z6J6 570 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 SAPCD2Q86UD0 394 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 CCDC112Q8NEF3 446 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 AFAP1L1Q8TED9 768 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 TRAPPC12Q8WVT3 735 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 ATP6V0A1Q93050 837 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 SLC35C1Q96A29 364 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 ISL2Q96A47 359 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 TMEM143Q96AN5 459 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 MAML3Q96JK9 1138 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 FAM84AQ96KN4 292 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 CCDC43Q96MW1 224 aaKnown RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 PARK7Q99497 189 aaKnown RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 DNAJC7Q99615 494 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 CBWD1Q9BRT8 395 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 CRACR2AQ9BSW2 395 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 LSM14BQ9BX40 385 aaKnown RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 POLR3FQ9H1D9 316 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 ATXN3LQ9H3M9 355 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 ST6GALNAC4Q9H4F1 302 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 DHX33Q9H6R0 707 aaKnown RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 ACSS3Q9H6R3 686 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 SIX2Q9NPC8 291 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 FAM207AQ9NSI2 230 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 FLRT1Q9NZU1 646 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 DIS3Q9Y2L1 958 aaKnown RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 PPP2R2CQ9Y2T4 447 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 R3HCC1Q9Y3T6 440 aaKnown RBP6.25□□□□□ -1.41
SF3B3-210ENST00000567654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.25□□□□□ -1.418e-15■□□□□ 8.8
SF3B3-210ENST00000567654 SCN1AP35498 2009 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 THSD7BQ9C0I4 1608 aa6.25□□□□□ -1.41
SF3B3-210ENST00000567654 FAM95CA0A1B0GW59 222 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 A0A1W2PQJ5 194 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 DENND3A2RUS2 1198 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 FAM221AA4D161 298 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 GOLGA8IPA6NC78 632 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 GOLGA8JA6NMD2 632 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 CCDC169A6NNP5 214 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 ZNF263O14978 683 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 SLC16A3O15427 465 aaKnown RBP6.24□□□□□ -1.41
SF3B3-210ENST00000567654 TLR2O60603 784 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 KIF20AO95235 890 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 GNA14O95837 355 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 TRIM49P0CI25 452 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 TRIM49CP0CI26 452 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 TXNP10599 105 aaKnown RBP6.24□□□□□ -1.41
SF3B3-210ENST00000567654 TGFB3P10600 412 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 TNNT1P13805 278 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 GLRA2P23416 452 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 ADSSP30520 456 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 NTF4P34130 210 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 ARL2P36404 184 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 STAT5BP51692 787 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 CCNA1P78396 465 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 CAP1Q01518 475 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 NEDD9Q14511 834 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 PLCB4Q15147 1175 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 MEA1Q16626 185 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 CBWD6Q4V339 395 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 DCAF17Q5H9S7 520 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-210ENST00000567654 FIGNQ5HY92 759 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 CBWD3Q5JTY5 395 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 CBWD5Q5RIA9 395 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 PRAMEF19Q5SWL8 479 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 FKBP15Q5T1M5 1219 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 RGMBQ6NW40 437 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 PDXDC1Q6P996 788 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 GJB7Q6PEY0 223 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 TRIM65Q6PJ69 517 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 OTUD6AQ7L8S5 288 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 NT5DC4Q86YG4 428 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms