RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 IL18RAPO95256 599 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 CD2BP2O95400 341 aaKnown RBP20.15■□□□□ 0.82
LINC01238-205ENST00000567549 PNPLA4P41247 253 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 MLLT6P55198 1093 aaPredicted RBP20.15■□□□□ 0.82
LINC01238-205ENST00000567549 LILRA4P59901 499 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 JADE1Q6IE81 842 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 SV2BQ7L1I2 683 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 ERMP1Q7Z2K6 904 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 CSGALNACT1Q8TDX6 532 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 RUBCNQ92622 972 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 CLDN23Q96B33 292 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 SENP8Q96LD8 212 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 ZNF560Q96MR9 790 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 HAPLN2Q9GZV7 340 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 CEP72Q9P209 647 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 FANCMQ8IYD8 2048 aa20.15■□□□□ 0.82
LINC01238-205ENST00000567549 DPYSL4O14531 572 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 FAM189A1O60320 539 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 LDHAP00338 332 aaKnown RBP20.14■□□□□ 0.81
LINC01238-205ENST00000567549 TAF6P49848 677 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 NRLP54845 237 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 TAF12Q16514 161 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 RRAGBQ5VZM2 374 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 CCDC73Q6ZRK6 1079 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 MFSD6LQ8IWD5 586 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 GPR161Q8N6U8 529 aaKnown RBP20.14■□□□□ 0.81
LINC01238-205ENST00000567549 ZSCAN18Q8TBC5 510 aaPredicted RBP20.14■□□□□ 0.81
LINC01238-205ENST00000567549 POMGNT1Q8WZA1 660 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 TCEAL4Q96EI5 215 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 HEBP1Q9NRV9 189 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 TIMM13Q9Y5L4 95 aaPredicted RBP20.14■□□□□ 0.81
LINC01238-205ENST00000567549 R4GN57 208 aa20.14■□□□□ 0.81
LINC01238-205ENST00000567549 CYP11A1P05108 521 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 GDI1P31150 447 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 ID4P47928 161 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 DUSP4Q13115 394 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 CUL4AQ13619 759 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 SV2CQ496J9 727 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 C9orf57Q5W0N0 161 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 STXBP4Q6ZWJ1 553 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 CACTINQ8WUQ7 758 aaKnown RBP20.13■□□□□ 0.81
LINC01238-205ENST00000567549 PGLYRP2Q96PD5 576 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 LRRC27Q9C0I9 530 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 MRPL44Q9H9J2 332 aaKnown RBP20.13■□□□□ 0.81
LINC01238-205ENST00000567549 R3HCC1Q9Y3T6 440 aaKnown RBP20.13■□□□□ 0.81
LINC01238-205ENST00000567549 PCDHB13Q9Y5F0 798 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 SRPRBQ9Y5M8 271 aaKnown RBP20.13■□□□□ 0.81
LINC01238-205ENST00000567549 STYXL1Q9Y6J8 313 aa20.13■□□□□ 0.81
LINC01238-205ENST00000567549 CACNA1IQ9P0X4 2223 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 PATJQ8NI35 1801 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 PIRO00625 290 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 KCNA4P22459 653 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 FCARP24071 287 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 NMT1P30419 496 aaKnown RBP20.12■□□□□ 0.81
LINC01238-205ENST00000567549 CSTF1Q05048 431 aaKnown RBP20.12■□□□□ 0.81
LINC01238-205ENST00000567549 GRM2Q14416 872 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 CENPPQ6IPU0 288 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 ZNF720Q7Z2F6 126 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 DCP1BQ8IZD4 617 aaKnown RBP20.12■□□□□ 0.81
LINC01238-205ENST00000567549 HS6ST3Q8IZP7 471 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 FAM200AQ8TCP9 573 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 SPPL2BQ8TCT7 592 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 PSMG2Q969U7 264 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 ACCSQ96QU6 501 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 PLA2G2FQ9BZM2 168 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 ZSCAN16Q9H4T2 348 aaPredicted RBP20.12■□□□□ 0.81
LINC01238-205ENST00000567549 C8orf33Q9H7E9 229 aaPredicted RBP20.12■□□□□ 0.81
LINC01238-205ENST00000567549 ZNF334Q9HCZ1 680 aaPredicted RBP20.12■□□□□ 0.81
LINC01238-205ENST00000567549 ZSCAN32Q9NX65 697 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 OBP2AQ9NY56 170 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 CFAP54Q96N23 3096 aa20.12■□□□□ 0.81
LINC01238-205ENST00000567549 ANO9A1A5B4 782 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 MTMR11A4FU01 709 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 TARSP26639 723 aaKnown RBP20.11■□□□□ 0.81
LINC01238-205ENST00000567549 CDC25CP30307 473 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 CCR2P41597 374 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 ACOT2P49753 483 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 LRRC32Q14392 662 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 PTPAQ15257 358 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 VITQ6UXI7 678 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 MAMSTRQ6ZN01 415 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 DYMQ7RTS9 669 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 FAM3CQ92520 227 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 INTS4Q96HW7 963 aaKnown RBP20.11■□□□□ 0.81
LINC01238-205ENST00000567549 DPP3Q9NY33 737 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 PIAS3Q9Y6X2 628 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 MORC2Q9Y6X9 1032 aaPredicted RBP20.11■□□□□ 0.81
LINC01238-205ENST00000567549 TCHHQ07283 1943 aa20.11■□□□□ 0.81
LINC01238-205ENST00000567549 A0A1W2PRU2 124 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 CYB561D2O14569 222 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 KIAA0391O15091 583 aaKnown RBP20.1■□□□□ 0.81
LINC01238-205ENST00000567549 CHADO15335 359 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 NFICP08651 508 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 CD72P21854 359 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 SDHBP21912 280 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 CCR3P51677 355 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 PLCB2Q00722 1185 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 TSPY1Q01534 308 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 TEAD2Q15562 447 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 SFR1Q86XK3 245 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms