RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 KLC4Q9NSK0 619 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 A0A0B4J269 797 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 GCOM1H8Y6P7 765 aaPredicted RBP4.41□□□□□ -1.7
CDH1-211ENST00000567320 MT-CO1P00395 513 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 CELA2AP08217 269 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 EBLN1P0CF75 366 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 PSMC1P62191 440 aaKnown RBP4.41□□□□□ -1.7
CDH1-211ENST00000567320 TUBB3Q13509 450 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 HLXQ14774 488 aaPredicted RBP4.41□□□□□ -1.7
CDH1-211ENST00000567320 RAB39AQ14964 217 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 PPP4R3AQ6IN85 833 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 GIMAP6Q6P9H5 292 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 KRT26Q7Z3Y9 468 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 SSH1Q8WYL5 1049 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 JADE3Q92613 823 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 SLC5A4Q9NY91 659 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 ZNF70Q9UC06 446 aaPredicted RBP4.41□□□□□ -1.7
CDH1-211ENST00000567320 MCM8Q9UJA3 840 aa4.41□□□□□ -1.7
CDH1-211ENST00000567320 COL3A1P02461 1466 aaPredicted RBP4.41□□□□□ -1.7
CDH1-211ENST00000567320 KLHL33A6NCF5 533 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 TRIAP1O43715 76 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 RPLP2P05387 115 aaKnown RBP4.4□□□□□ -1.71
CDH1-211ENST00000567320 RHOP08100 348 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 GNAI3P08754 354 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 ITGB6P18564 788 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 SMARCA1P28370 1054 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 IARSP41252 1262 aaKnown RBP4.4□□□□□ -1.71
CDH1-211ENST00000567320 WASP42768 502 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 CCT8P50990 548 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 HNRNPMP52272 730 aaKnown RBP eCLIP4.4□□□□□ -1.71
CDH1-211ENST00000567320 GNAI1P63096 354 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 KIF23Q02241 960 aaPredicted RBP4.4□□□□□ -1.71
CDH1-211ENST00000567320 LLGL1Q15334 1064 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 MTX3Q5HYI7 312 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 FAM9AQ8IZU1 332 aaPredicted RBP4.4□□□□□ -1.71
CDH1-211ENST00000567320 ZNF366Q8N895 744 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 VGLL2Q8N8G2 317 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 ANKS1AQ92625 1134 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 KAT5Q92993 513 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 LRIG1Q96JA1 1093 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 BRD9Q9H8M2 597 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 SLAMF7Q9NQ25 335 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 MAN1C1Q9NR34 630 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.4□□□□□ -1.71
CDH1-211ENST00000567320 TUBD1Q9UJT1 453 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 ADAM21Q9UKJ8 722 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 MRFAP1Q9Y605 127 aa4.4□□□□□ -1.71
CDH1-211ENST00000567320 CCDC154A6NI56 674 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 TRIM75PA6NK02 468 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 VWC2LB2RUY7 222 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 SGTAO43765 313 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 VPS4BO75351 444 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 HNRNPCP07910 306 aaKnown RBP eCLIP4.39□□□□□ -1.71
CDH1-211ENST00000567320 MYBL2P10244 700 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 C5AR1P21730 350 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 ITPKBP27987 946 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 NDUFV1P49821 464 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 SLC10A2Q12908 348 aaPredicted RBP4.39□□□□□ -1.71
CDH1-211ENST00000567320 UAP1L1Q3KQV9 507 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 C3orf36Q3SXR2 165 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 PLAC9Q5JTB6 97 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 FKBP10Q96AY3 582 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 PBKQ96KB5 322 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 ACTRT3Q9BYD9 372 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 LIMCH1Q9UPQ0 1083 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 KAT6AQ92794 2004 aa4.39□□□□□ -1.71
CDH1-211ENST00000567320 WIPF3A6NGB9 483 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 ZNF785A8K8V0 405 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 KRTAP29-1A8MX34 341 aaPredicted RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 E7ENX8 843 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 K7ESF4 209 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 HTRA2O43464 458 aaPredicted RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 ANXA1P04083 346 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 VIL1P09327 827 aaKnown RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 ZFXP17010 805 aaPredicted RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 NDUFB7P17568 137 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 CHRM3P20309 590 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 POU6F2P78424 691 aaPredicted RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 TAP2Q03519 686 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 TLE1Q04724 770 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 TBCCQ15814 346 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 KHDC1Q4VXA5 237 aaKnown RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 CCDC93Q567U6 631 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 C1orf162Q8NEQ5 155 aaPredicted RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 FAXDC2Q96IV6 333 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 VRK1Q99986 396 aaPredicted RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 ALG8Q9BVK2 526 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 C1QTNF7Q9BXJ2 289 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 FAM126AQ9BYI3 521 aaPredicted RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 PUS7LQ9H0K6 701 aaKnown RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 NRIP3Q9NQ35 241 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 GNL3LQ9NVN8 582 aaKnown RBP4.38□□□□□ -1.71
CDH1-211ENST00000567320 EHD3Q9NZN3 535 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 SH3BP4Q9P0V3 963 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 CALCOCO1Q9P1Z2 691 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 AOX1Q06278 1338 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 ADGRA2Q96PE1 1338 aa4.38□□□□□ -1.71
CDH1-211ENST00000567320 LINC01548A6NM66 108 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 E9PLN8 166 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 PRR35P0CG20 571 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms