RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 TTC13Q8NBP0 860 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 EPS8L3Q8TE67 593 aaKnown RBP9.87□□□□□ -0.83
BBS4-210ENST00000566400 ARHGEF2Q92974 986 aaKnown RBP9.87□□□□□ -0.83
BBS4-210ENST00000566400 GRAMD1AQ96CP6 724 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 TARS2Q9BW92 718 aaKnown RBP9.87□□□□□ -0.83
BBS4-210ENST00000566400 SENP1Q9P0U3 644 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 WDR35Q9P2L0 1181 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 COL11A1P12107 1806 aaPredicted RBP9.87□□□□□ -0.83
BBS4-210ENST00000566400 WDR81Q562E7 1941 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 TMEM191CA6NGB0 347 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 SLC25A27O95847 323 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 TNNC2P02585 160 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 TMEM191BP0C7N4 346 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 SSR1P43307 286 aaKnown RBP9.87□□□□□ -0.83
BBS4-210ENST00000566400 CAPSQ13938 189 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 CNGA2Q16280 664 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 EAPPQ56P03 285 aaPredicted RBP9.87□□□□□ -0.83
BBS4-210ENST00000566400 ICE2Q659A1 982 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 DNAJC24Q6P3W2 148 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 DCUN1D2Q6PH85 259 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 EXOC3L1Q86VI1 746 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 CCDC13Q8IYE1 715 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 ZCCHC9Q8N567 271 aaKnown RBP9.87□□□□□ -0.83
BBS4-210ENST00000566400 UBR7Q8N806 425 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 ANKRD36BP1Q96IX9 119 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 TCHPQ9BT92 498 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 CCDC113Q9H0I3 377 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 ADAM7Q9H2U9 754 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 APOBEC3GQ9HC16 384 aaKnown RBP9.87□□□□□ -0.83
BBS4-210ENST00000566400 NEU2Q9Y3R4 380 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 KIAA1217Q5T5P2 1943 aa9.87□□□□□ -0.83
BBS4-210ENST00000566400 GSTTP1A0A1W2PQM5 241 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 SMIM23A6NLE4 172 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 CCT8L1PA6NM43 557 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 O00370 1275 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 DNAJC8O75937 253 aaPredicted RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 IL18RAPO95256 599 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 VIMP08670 466 aaKnown RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 KRT7P08729 469 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 UBA1P22314 1058 aaKnown RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 SLC18A1P54219 525 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 SP2Q02086 613 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 MORF4L2Q15014 288 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 ACAP1Q15027 740 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 RASA2Q15283 850 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 KYAT1Q16773 422 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 HADHQ16836 314 aaKnown RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 ANKRD20A8PQ5CZ79 823 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 IZUMO3Q5VZ72 239 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 HIBCHQ6NVY1 386 aaPredicted RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 SEPT14Q6ZU15 432 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 PLPPR4Q7Z2D5 763 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.86□□□□□ -0.83
BBS4-210ENST00000566400 FNIP1Q8TF40 1166 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 CCT6BQ92526 530 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 SGSM3Q96HU1 749 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 PRMT1Q99873 361 aaKnown RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 MIS12Q9H081 205 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 NKIRAS1Q9NYS0 192 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 NUB1Q9Y5A7 615 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 CD2APQ9Y5K6 639 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 DNALI1O14645 258 aaPredicted RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 LIASO43766 372 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 SUN1O94901 812 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 ACSL3O95573 720 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 GSCP56915 257 aaPredicted RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 IFI35P80217 286 aaPredicted RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 QPCTQ16769 361 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 TFDP3Q5H9I0 405 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 ZFYVE27Q5T4F4 411 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 WDR78Q5VTH9 848 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 LMBRD2Q68DH5 695 aaPredicted RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 SPOPLQ6IQ16 392 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 ERICH1Q86X53 443 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 TDRPQ86YL5 185 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 TTC39CQ8N584 583 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 MDM1Q8TC05 714 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 ACO2Q99798 780 aaKnown RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 LHX5Q9H2C1 402 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 AAASQ9NRG9 546 aa9.86□□□□□ -0.83
BBS4-210ENST00000566400 SCAF8Q9UPN6 1271 aaKnown RBP9.86□□□□□ -0.83
BBS4-210ENST00000566400 MYH9P35579 1960 aaKnown RBP9.85□□□□□ -0.83
BBS4-210ENST00000566400 BRCA1P38398 1863 aaKnown RBP9.85□□□□□ -0.83
BBS4-210ENST00000566400 ZNF541Q9H0D2 1346 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 CFAP73A6NFT4 308 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 B4GALT4O60513 344 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 MSCO60682 206 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 KRT1P04264 644 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 PRKCBP05771 671 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 ITGAVP06756 1048 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 YBX3P16989 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
BBS4-210ENST00000566400 KLRC2P26717 231 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 HNRNPH1P31943 449 aaKnown RBP9.85□□□□□ -0.83
BBS4-210ENST00000566400 TCF7P36402 384 aaPredicted RBP9.85□□□□□ -0.83
BBS4-210ENST00000566400 SLCO1A2P46721 670 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 LONRF1Q17RB8 773 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 SWT1Q5T5J6 900 aaKnown RBP9.85□□□□□ -0.83
BBS4-210ENST00000566400 MPZL3Q6UWV2 235 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 ANKS1BQ7Z6G8 1248 aa9.85□□□□□ -0.83
BBS4-210ENST00000566400 NLGN2Q8NFZ4 835 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms