RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 LSG1Q9H089 658 aaKnown RBP18.28■□□□□ 0.52
CLK3-217ENST00000566126 SLKQ9H2G2 1235 aaPredicted RBP18.28■□□□□ 0.52
CLK3-217ENST00000566126 CRISPLD1Q9H336 500 aa18.28■□□□□ 0.52
CLK3-217ENST00000566126 FSCN3Q9NQT6 498 aa18.28■□□□□ 0.52
CLK3-217ENST00000566126 EDN1P05305 212 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 WEE1P30291 646 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 RCAN1P53805 252 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 NECTIN1Q15223 517 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 EPHA7Q15375 998 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 FBXO43Q4G163 708 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 TRIM68Q6AZZ1 485 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 MOXD1Q6UVY6 613 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 HDDC3Q8N4P3 179 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 PNPLA1Q8N8W4 532 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 CCDC148Q8NFR7 591 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 BEST2Q8NFU1 509 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 SMG9Q9H0W8 520 aaKnown RBP18.27■□□□□ 0.52
CLK3-217ENST00000566126 ATXN3LQ9H3M9 355 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 RWDD1Q9H446 243 aaPredicted RBP18.27■□□□□ 0.52
CLK3-217ENST00000566126 EBF3Q9H4W6 596 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 ZSWIM4Q9H7M6 989 aa18.27■□□□□ 0.52
CLK3-217ENST00000566126 THG1LQ9NWX6 298 aaKnown RBP18.27■□□□□ 0.52
CLK3-217ENST00000566126 DDX25Q9UHL0 483 aaKnown RBP18.27■□□□□ 0.52
CLK3-217ENST00000566126 TNFRSF10BO14763 440 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 DGAT1O75907 488 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 CD59P13987 128 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 PTGER3P43115 390 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 CYP4A11Q02928 519 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 EEF1DP3Q658K8 133 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 ZNF280DQ6N043 979 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 ARMCX6Q7L4S7 300 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 ZNF605Q86T29 641 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 SYT12Q8IV01 421 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 TSTD1Q8NFU3 115 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 ACDQ96AP0 544 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 POLR3FQ9H1D9 316 aaPredicted RBP18.26■□□□□ 0.51
CLK3-217ENST00000566126 KCNMB3Q9NPA1 279 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 DKK4Q9UBT3 224 aa18.26■□□□□ 0.51
CLK3-217ENST00000566126 SMIM28A0A1B0GU29 152 aa18.25■□□□□ 0.51
CLK3-217ENST00000566126 LRRIQ4A6NIV6 560 aa18.25■□□□□ 0.51
CLK3-217ENST00000566126 PODXLO00592 558 aa18.25■□□□□ 0.51
CLK3-217ENST00000566126 FTH1P19P0C7X4 201 aa18.25■□□□□ 0.51
CLK3-217ENST00000566126 CPB1P15086 417 aa18.25■□□□□ 0.51
CLK3-217ENST00000566126 HNRNPDQ14103 355 aaKnown RBP18.25■□□□□ 0.51
CLK3-217ENST00000566126 CDCA2Q69YH5 1023 aaPredicted RBP18.25■□□□□ 0.51
CLK3-217ENST00000566126 CNOT6LQ96LI5 555 aaKnown RBP18.25■□□□□ 0.51
CLK3-217ENST00000566126 CAMK1GQ96NX5 476 aa18.25■□□□□ 0.51
CLK3-217ENST00000566126 P2RY13Q9BPV8 354 aa18.25■□□□□ 0.51
CLK3-217ENST00000566126 GTPBP2Q9BX10 602 aaKnown RBP18.25■□□□□ 0.51
CLK3-217ENST00000566126 TBX20Q9UMR3 447 aa18.25■□□□□ 0.51
CLK3-217ENST00000566126 ATXN2Q99700 1313 aaKnown RBP18.24■□□□□ 0.51
CLK3-217ENST00000566126 CEP192Q8TEP8 1941 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 PLXND1Q9Y4D7 1925 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 A0A087WV48 116 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 M0R2N6 131 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 ATXN7O15265 892 aaPredicted RBP18.24■□□□□ 0.51
CLK3-217ENST00000566126 OPHN1O60890 802 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 ARSAP15289 507 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 GABRR2P28476 465 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 EPHB3P54753 998 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 CYP4F8P98187 520 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 PLD1Q13393 1074 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 TRIP6Q15654 476 aaKnown RBP18.24■□□□□ 0.51
CLK3-217ENST00000566126 ANO7Q6IWH7 933 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 TMEFF1Q8IYR6 380 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 MDGA1Q8NFP4 955 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 OLIG1Q8TAK6 271 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 FNBP1Q96RU3 617 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 ADPGKQ9BRR6 497 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 C22orf23Q9BZE7 217 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 TASP1Q9H6P5 420 aa18.24■□□□□ 0.51
CLK3-217ENST00000566126 ZNF638Q14966 1978 aaKnown RBP18.24■□□□□ 0.51
CLK3-217ENST00000566126 DENND4CQ5VZ89 1909 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 SLITRK3O94933 977 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 DUSP4Q13115 394 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 PRPF4BQ13523 1007 aaKnown RBP18.23■□□□□ 0.51
CLK3-217ENST00000566126 MAPK6Q16659 721 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 PEAR1Q5VY43 1037 aaPredicted RBP18.23■□□□□ 0.51
CLK3-217ENST00000566126 LPCAT2Q7L5N7 544 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 DNAJB7Q7Z6W7 309 aaPredicted RBP18.23■□□□□ 0.51
CLK3-217ENST00000566126 TPH2Q8IWU9 490 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 ZNF843Q8N446 348 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 FRMD1Q8N878 549 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 OR2I1PQ8NGU4 316 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 DDX12PQ92771 950 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 HAS1Q92839 578 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 PSMG2Q969U7 264 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 SUSD3Q96L08 255 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 FAM20AQ96MK3 541 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 PGLYRP2Q96PD5 576 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 GPRC5CQ9NQ84 441 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 PILRBQ9UKJ0 227 aa18.23■□□□□ 0.51
CLK3-217ENST00000566126 NAP1L2Q9ULW6 460 aaPredicted RBP18.23■□□□□ 0.51
CLK3-217ENST00000566126 CCDC196A0A1B0GTZ2 297 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 CFIP05156 583 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 OR4Q2P0C623 313 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 GJA4P35212 333 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 ATXN3P54252 364 aaPredicted RBP18.22■□□□□ 0.51
CLK3-217ENST00000566126 NLRP5P59047 1200 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms