RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 POLIQ9UNA4 740 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 SSX2IPQ9Y2D8 614 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 TTC3P53804 2025 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 SCN5AQ14524 2016 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 A0A1W2PPC1 479 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 A0A1W2PQJ5 194 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 LCHNA4D1U4 455 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 LINC01553A4QN01 128 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 M0QZQ0 153 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 LRRN2O75325 713 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 TACC1O75410 805 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 FGF18O76093 207 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 CA3P07451 260 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 WEE2P0C1S8 567 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 KRT5P13647 590 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 MYOGP15173 224 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 TYMPP19971 482 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 GNL1P36915 607 aaPredicted RBP8.33□□□□□ -1.08
CDH1-208ENST00000565810 USP8P40818 1118 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 STAT1P42224 750 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 CDH8P55286 799 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 SMAD3P84022 425 aaKnown RBP8.33□□□□□ -1.08
CDH1-208ENST00000565810 PLCB3Q01970 1234 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 YWHAHQ04917 246 aaPredicted RBP8.33□□□□□ -1.08
CDH1-208ENST00000565810 USP41Q3LFD5 358 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 FAM171A1Q5VUB5 890 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 PPP2R2DQ66LE6 453 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 SCARA3Q6AZY7 606 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 FAM109BQ6ICB4 259 aaPredicted RBP8.33□□□□□ -1.08
CDH1-208ENST00000565810 IQCEQ6IPM2 695 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 PDXDC1Q6P996 788 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 GJB7Q6PEY0 223 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.33□□□□□ -1.08
CDH1-208ENST00000565810 CEP57Q86XR8 500 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 ARHGEF19Q8IW93 802 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 ADGRF2Q8IZF7 708 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 SPC24Q8NBT2 197 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 OR6B3Q8NGW1 331 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 ELMO3Q96BJ8 720 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 C11orf84Q9BUA3 381 aaPredicted RBP8.33□□□□□ -1.08
CDH1-208ENST00000565810 OXCT2Q9BYC2 517 aaPredicted RBP8.33□□□□□ -1.08
CDH1-208ENST00000565810 PBX4Q9BYU1 374 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 GANQ9H2C0 597 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 SLC28A3Q9HAS3 691 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 SIX2Q9NPC8 291 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 NLRC4Q9NPP4 1024 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 ZNHIT6Q9NWK9 470 aaKnown RBP8.33□□□□□ -1.08
CDH1-208ENST00000565810 IMPACTQ9P2X3 320 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 MYO6Q9UM54 1294 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 BARX2Q9UMQ3 279 aaPredicted RBP8.33□□□□□ -1.08
CDH1-208ENST00000565810 LUC7L2Q9Y383 392 aaKnown RBP8.33□□□□□ -1.08
CDH1-208ENST00000565810 PCDHB4Q9Y5E5 795 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 FHOD1Q9Y613 1164 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 ALPK3Q96L96 1907 aa8.33□□□□□ -1.08
CDH1-208ENST00000565810 A8MXQ7 604 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 AKR1B15C9JRZ8 316 aaPredicted RBP8.32□□□□□ -1.08
CDH1-208ENST00000565810 F8W810 466 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 H7C4K7 107 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 I3L4J1 428 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 LPXNO60711 386 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 NOL4O94818 638 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 SOD2P04179 222 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 CYP11A1P05108 521 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 ITGB1P05556 798 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 URODP06132 367 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 CD58P19256 250 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 WARSP23381 471 aaKnown RBP8.32□□□□□ -1.08
CDH1-208ENST00000565810 PCSK1P29120 753 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 KRT9P35527 623 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 PBX2P40425 430 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 ASPAP45381 313 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 BPIFB4P59827 614 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 ERVK-21P61565 698 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 ZBED6P86452 979 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 APBA1Q02410 837 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 UBE3AQ05086 875 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 DRAP1Q14919 205 aaPredicted RBP8.32□□□□□ -1.08
CDH1-208ENST00000565810 SOWAHAQ2M3V2 549 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 PRPF38BQ5VTL8 546 aaKnown RBP8.32□□□□□ -1.08
CDH1-208ENST00000565810 WSCD1Q658N2 575 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 OVOS1Q6IE37 1185 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 ZNF280DQ6N043 979 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 DPY19L2P1Q6NXN4 242 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 TMEM270Q6UE05 265 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 CD300LGQ6UXG3 332 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 DDX53Q86TM3 631 aaKnown RBP8.32□□□□□ -1.08
CDH1-208ENST00000565810 UNC93AQ86WB7 457 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 TMEM173Q86WV6 379 aaPredicted RBP8.32□□□□□ -1.08
CDH1-208ENST00000565810 CNGA4Q8IV77 575 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 VPS52Q8N1B4 723 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 PDCL2Q8N4E4 241 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 KLHL23Q8NBE8 558 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 TIFAQ96CG3 184 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 TNIP3Q96KP6 325 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 KREMEN1Q96MU8 473 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 MRPL45Q9BRJ2 306 aaKnown RBP8.32□□□□□ -1.08
CDH1-208ENST00000565810 C17orf80Q9BSJ5 609 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 TTPALQ9BTX7 342 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 NT5C1AQ9BXI3 368 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 NAA15Q9BXJ9 866 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms