RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 NBL1P41271 181 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 DUSP4Q13115 394 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 TANGO2Q6ICL3 276 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 CENPPQ6IPU0 288 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 PDZD4Q76G19 769 aaPredicted RBP16.95■□□□□ 0.3
CDH3-204ENST00000565453 NT5DC4Q86YG4 428 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 BRSK2Q8IWQ3 736 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 ELMOD1Q8N336 334 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 OR10T2Q8NGX3 314 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 ZNF512Q96ME7 567 aaPredicted RBP16.95■□□□□ 0.3
CDH3-204ENST00000565453 DDX23Q9BUQ8 820 aaKnown RBP16.95■□□□□ 0.3
CDH3-204ENST00000565453 LRRC3Q9BY71 257 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 TNMDQ9H2S6 317 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 KBTBD4Q9NVX7 518 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 DPP3Q9NY33 737 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 SCN1AP35498 2009 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 STK25O00506 426 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 TAF6P49848 677 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 FAM78AQ5JUQ0 283 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 CYP4A22Q5TCH4 519 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 IQCEQ6IPM2 695 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 SHC4Q6S5L8 630 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 TMC8Q8IU68 726 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 LEMD2Q8NC56 503 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 ELSPBP1Q96BH3 223 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 SAAL1Q96ER3 474 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 CBWD1Q9BRT8 395 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 FAM213AQ9BRX8 229 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 FOXQ1Q9C009 403 aa16.94■□□□□ 0.3
CDH3-204ENST00000565453 CYB561D2O14569 222 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 CUTAO60888 179 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 PRPF6O94906 941 aaKnown RBP16.93■□□□□ 0.3
CDH3-204ENST00000565453 DCNP07585 359 aaKnown RBP16.93■□□□□ 0.3
CDH3-204ENST00000565453 ZSCAN22P10073 491 aaPredicted RBP16.93■□□□□ 0.3
CDH3-204ENST00000565453 GLULP15104 373 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 RFX1P22670 979 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 PFKPQ01813 784 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 PRKCQQ04759 706 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 PLD1Q13393 1074 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 SNW1Q13573 536 aaKnown RBP16.93■□□□□ 0.3
CDH3-204ENST00000565453 ANGPT1Q15389 498 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 MLF2Q15773 248 aaPredicted RBP16.93■□□□□ 0.3
CDH3-204ENST00000565453 SLC44A4Q53GD3 710 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 FOXD4L5Q5VV16 416 aaPredicted RBP16.93■□□□□ 0.3
CDH3-204ENST00000565453 HSCBQ8IWL3 235 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 CCDC65Q8IXS2 484 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 TTC9BQ8N6N2 239 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 ATAD1Q8NBU5 361 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 GLIS3Q8NEA6 775 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 PJA1Q8NG27 643 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 CXorf38Q8TB03 319 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 SHKBP1Q8TBC3 707 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 FOXD4L4Q8WXT5 416 aaPredicted RBP16.93■□□□□ 0.3
CDH3-204ENST00000565453 ZSWIM3Q96MP5 696 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 ASB16Q96NS5 453 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 TRIM9Q9C026 710 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 ZCWPW1Q9H0M4 648 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 CUEDC2Q9H467 287 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 ASAH2Q9NR71 780 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 SLC27A5Q9Y2P5 690 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 SIT1Q9Y3P8 196 aa16.93■□□□□ 0.3
CDH3-204ENST00000565453 LDHAP00338 332 aaKnown RBP16.92■□□□□ 0.3
CDH3-204ENST00000565453 F13A1P00488 732 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 MYL4P12829 197 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 GJA1P17302 382 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 ARMCX5Q6P1M9 558 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 CNNM4Q6P4Q7 775 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 SYCP3Q8IZU3 236 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 HPS3Q969F9 1004 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 SHDQ96IW2 340 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 PYM1Q9BRP8 204 aaKnown RBP16.92■□□□□ 0.3
CDH3-204ENST00000565453 TMEM206Q9H813 350 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 HSFX1Q9UBD0 423 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 DSEQ9UL01 958 aa16.92■□□□□ 0.3
CDH3-204ENST00000565453 COL4A2P08572 1712 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 KANSL1LA0AUZ9 987 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 GOLGA8IPA6NC78 632 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 SHISA7A6NL88 538 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 GOLGA8JA6NMD2 632 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 KPNA7A9QM74 516 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 EXTL3O43909 919 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 GFRA3O60609 400 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 LRRN2O75325 713 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 PDIA4P13667 645 aaKnown RBP16.91■□□□□ 0.3
CDH3-204ENST00000565453 HOXD13P35453 343 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 TEAD2Q15562 447 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 SV2CQ496J9 727 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 WSCD1Q658N2 575 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 SCARA3Q6AZY7 606 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 LRRTM3Q86VH5 581 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 C1orf127Q8N9H9 656 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 SMARCD2Q92925 531 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 DHX58Q96C10 678 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 FAM84AQ96KN4 292 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 LRRC27Q9C0I9 530 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 TRPV4Q9HBA0 871 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 ZFP14Q9HCL3 533 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 RBAKQ9NYW8 714 aaPredicted RBP16.91■□□□□ 0.3
CDH3-204ENST00000565453 NCANO14594 1321 aa16.91■□□□□ 0.3
CDH3-204ENST00000565453 SOAT2O75908 522 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms