RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 IMPDH2P12268 514 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 SERPINB3P29508 390 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 CYP1B1Q16678 543 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 DALRD3Q5D0E6 543 aaKnown RBP17.21■□□□□ 0.35
LINC00554-201ENST00000564841 C1QTNF12Q5T7M4 302 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 SYDE2Q5VT97 1194 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 LVRNQ6Q4G3 990 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 ZNF75CPQ92670 426 aaPredicted RBP17.21■□□□□ 0.35
LINC00554-201ENST00000564841 PDP2Q9P2J9 529 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 EXOC1LA0A1B0GW35 172 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 TGFB1I1O43294 461 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 ENTPD3O75355 529 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 VIL1P09327 827 aaKnown RBP17.21■□□□□ 0.35
LINC00554-201ENST00000564841 ADRA1DP25100 572 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 FMO5P49326 533 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 TPH2Q8IWU9 490 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 FAM186BQ8IYM0 893 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 SNF8Q96H20 258 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 COL4A5P29400 1685 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 EML1O00423 815 aa17.21■□□□□ 0.34
LINC00554-201ENST00000564841 WNT10BO00744 389 aa17.21■□□□□ 0.34
LINC00554-201ENST00000564841 PFDN1O60925 122 aa17.21■□□□□ 0.34
LINC00554-201ENST00000564841 ZNF76P36508 570 aa17.21■□□□□ 0.34
LINC00554-201ENST00000564841 FAM161BQ96MY7 647 aa17.21■□□□□ 0.34
LINC00554-201ENST00000564841 EURLQ9NYK6 297 aa17.21■□□□□ 0.34
LINC00554-201ENST00000564841 WHRNQ9P202 907 aa17.21■□□□□ 0.34
LINC00554-201ENST00000564841 HSFX1Q9UBD0 423 aa17.21■□□□□ 0.34
LINC00554-201ENST00000564841 LGALS13Q9UHV8 139 aa17.21■□□□□ 0.34
LINC00554-201ENST00000564841 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 MIF4GDA9UHW6 222 aaKnown RBP17.2■□□□□ 0.34
LINC00554-201ENST00000564841 DDX39AO00148 427 aaKnown RBP17.2■□□□□ 0.34
LINC00554-201ENST00000564841 MAGEB2O15479 319 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 CCDC22O60826 627 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 BANF1O75531 89 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 CETN2P41208 172 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 ARHGAP4P98171 946 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 TTLL12Q14166 644 aaPredicted RBP17.2■□□□□ 0.34
LINC00554-201ENST00000564841 PDK4Q16654 411 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 C2CD6Q53TS8 623 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 LRRC6Q86X45 466 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 SNRNP27Q8WVK2 155 aaKnown RBP17.2■□□□□ 0.34
LINC00554-201ENST00000564841 HIC2Q96JB3 615 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 AMNQ9BXJ7 453 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 INTS2Q9H0H0 1204 aaKnown RBP17.2■□□□□ 0.34
LINC00554-201ENST00000564841 EBF3Q9H4W6 596 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 SYNCQ9H7C4 482 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 STX18Q9P2W9 335 aaKnown RBP17.2■□□□□ 0.34
LINC00554-201ENST00000564841 BLOC1S6Q9UL45 172 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 PRR12Q9ULL5 1215 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 CALUO43852 315 aaPredicted RBP17.2■□□□□ 0.34
LINC00554-201ENST00000564841 ATF2P15336 505 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 HSPA6P17066 643 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 LSAMPQ13449 338 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 PRKG1Q13976 671 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 P3H1Q32P28 736 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 SATL1Q86VE3 508 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 CPXCR1Q8N123 301 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 MYO3BQ8WXR4 1341 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 CD101Q93033 1021 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 MRIQ9BWK5 157 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 MAK16Q9BXY0 300 aaKnown RBP17.2■□□□□ 0.34
LINC00554-201ENST00000564841 VCX3BQ9H321 246 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 VCX3AQ9NNX9 186 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 UBE2TQ9NPD8 197 aaPredicted RBP17.2■□□□□ 0.34
LINC00554-201ENST00000564841 HOMER2Q9NSB8 354 aa17.2■□□□□ 0.34
LINC00554-201ENST00000564841 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.19■□□□□ 0.34
LINC00554-201ENST00000564841 TISP43B9A030 160 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 OPHN1O60890 802 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 ITIH2P19823 946 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 RASA3Q14644 834 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 SLC45A4Q5BKX6 768 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 CIAPIN1Q6FI81 312 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 LLGL2Q6P1M3 1020 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 PTCD3Q96EY7 689 aaKnown RBP17.19■□□□□ 0.34
LINC00554-201ENST00000564841 NUP85Q9BW27 656 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 CYLDQ9NQC7 956 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 ZBTB21Q9ULJ3 1066 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 PCDHGA4Q9Y5G9 962 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 PDXKO00764 312 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 HAUS5O94927 633 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 ANXA13P27216 316 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 CLK2P49760 499 aaKnown RBP17.19■□□□□ 0.34
LINC00554-201ENST00000564841 GPC5P78333 572 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 ACBD5Q5T8D3 534 aaPredicted RBP17.19■□□□□ 0.34
LINC00554-201ENST00000564841 ARHGEF19Q8IW93 802 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 RHOT2Q8IXI1 618 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 GLIS1Q8NBF1 620 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 DCAF4Q8WV16 495 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 PHF12Q96QT6 1004 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 FAM192AQ9GZU8 254 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 LRRC19Q9H756 370 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 ZNF232Q9UNY5 417 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 DNM3Q9UQ16 869 aa17.19■□□□□ 0.34
LINC00554-201ENST00000564841 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.19■□□□□ 0.34
LINC00554-201ENST00000564841 SGPL1O95470 568 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 SPATA31C1P0DKV0 1188 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 FKBP1AP62942 108 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms