RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 SV2CQ496J9 727 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 TCERG1LQ5VWI1 586 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 PLPP4Q5VZY2 271 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 KRT39Q6A163 491 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 SMYD5Q6GMV2 418 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 ZNF280BQ86YH2 543 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 SLC39A11Q8N1S5 342 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 SPATA18Q8TC71 538 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 IGSF21Q96ID5 467 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 FAM124BQ9H5Z6 455 aaPredicted RBP20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 TMEM8AQ9HCN3 771 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 NGRNQ9NPE2 291 aaKnown RBP20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 MIOSQ9NXC5 875 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 DSEQ9UL01 958 aa20.35■□□□□ 0.85
SYNGR3-203ENST00000563869 GOLGA6L19H0YKK7 550 aa20.34■□□□□ 0.85
SYNGR3-203ENST00000563869 STAU1O95793 577 aaKnown RBP20.34■□□□□ 0.85
SYNGR3-203ENST00000563869 BIRC3Q13489 604 aa20.34■□□□□ 0.85
SYNGR3-203ENST00000563869 DDX53Q86TM3 631 aaKnown RBP20.34■□□□□ 0.85
SYNGR3-203ENST00000563869 FAM200AQ8TCP9 573 aa20.34■□□□□ 0.85
SYNGR3-203ENST00000563869 BORCS6Q96GS4 357 aa20.34■□□□□ 0.85
SYNGR3-203ENST00000563869 TCF25Q9BQ70 676 aa20.34■□□□□ 0.85
SYNGR3-203ENST00000563869 TSPY26PQ9H489 355 aa20.34■□□□□ 0.85
SYNGR3-203ENST00000563869 ENTPD7Q9NQZ7 604 aa20.34■□□□□ 0.85
SYNGR3-203ENST00000563869 NR2E1Q9Y466 385 aa20.34■□□□□ 0.85
SYNGR3-203ENST00000563869 ANO9A1A5B4 782 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 CASTOR2A6NHX0 329 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 TULP1O00294 542 aaPredicted RBP20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 FAM163BP0C2L3 166 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 TRIM21P19474 475 aaKnown RBP20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 MTIF2P46199 727 aaKnown RBP20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 SLC11A1P49279 550 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 TAF6P49848 677 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 MXI1P50539 228 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 ZACNQ401N2 412 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 DCAF17Q5H9S7 520 aaPredicted RBP20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 C9orf57Q5W0N0 161 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 TRAPPC11Q7Z392 1133 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 EFCAB13Q8IY85 973 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 APPL2Q8NEU8 664 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 CNOT6LQ96LI5 555 aaKnown RBP20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 FAM81BQ96LP2 452 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 APOL5Q9BWW9 433 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 MTMR12Q9C0I1 747 aa20.33■□□□□ 0.85
SYNGR3-203ENST00000563869 LRRIQ3A6PVS8 624 aaPredicted RBP20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 HIDE1A8MVS5 230 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 PROB1E7EW31 1015 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 H0Y858 1186 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 PIRO00625 290 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 SYN3O14994 580 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 PDGFBP01127 241 aaPredicted RBP20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 CDK11BP21127 795 aaKnown RBP20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 CLCNKBP51801 687 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 AFF1P51825 1210 aaKnown RBP20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 MAN2A1Q16706 1144 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 SGSM1Q2NKQ1 1148 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 LLGL2Q6P1M3 1020 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 C11orf57Q6ZUT1 292 aaPredicted RBP20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 TRIM59Q8IWR1 403 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 UBALD2Q8IYN6 164 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 TTC39CQ8N584 583 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 KREMEN2Q8NCW0 462 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 CASP10Q92851 521 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 DNAJB4Q9UDY4 337 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 SORCS3Q9UPU3 1222 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 CACNA1HO95180 2353 aa20.32■□□□□ 0.84
SYNGR3-203ENST00000563869 GTPBP10A4D1E9 387 aaKnown RBP20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 KCNJ18B7U540 433 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 MEFVO15553 781 aaPredicted RBP20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 GALR2O43603 387 aaPredicted RBP20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 AFPP02771 609 aaKnown RBP20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 ITGB3P05106 788 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 KRT19P08727 400 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 SP100P23497 879 aaPredicted RBP20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 KCNJ12Q14500 433 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 USP41Q3LFD5 358 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 DPH6Q7L8W6 267 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 C1orf127Q8N9H9 656 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 FBXL13Q8NEE6 735 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 ZSWIM2Q8NEG5 633 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 SLC35C1Q96A29 364 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 C18orf25Q96B23 403 aaPredicted RBP20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 VRTNQ9H8Y1 702 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 TUBGCP4Q9UGJ1 667 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 PRG3Q9Y2Y8 225 aaPredicted RBP20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 SCN1AP35498 2009 aa20.31■□□□□ 0.84
SYNGR3-203ENST00000563869 MYO10Q9HD67 2058 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 SOD2P04179 222 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 ODC1P11926 461 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 SOX4Q06945 474 aaPredicted RBP20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 MTMR3Q13615 1198 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 NCOA4Q13772 614 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 TCP11X2Q5H9J9 407 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 WDR44Q5JSH3 913 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 CDKAL1Q5VV42 579 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 KIAA1841Q6NSI8 718 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 FUT10Q6P4F1 479 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 SV2AQ7L0J3 742 aa20.3■□□□□ 0.84
SYNGR3-203ENST00000563869 TMC7Q7Z402 723 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 253.1 ms