RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 TMEM161BQ8NDZ6 487 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CAGE1Q8TC20 777 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 UBASH3BQ8TF42 649 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 TMEM40Q8WWA1 233 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 WFDC12Q8WWY7 111 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 KCNN1Q92952 543 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 FDXACB1Q9BRP7 624 aaPredicted RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 KIFC3Q9BVG8 833 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 STRA6Q9BX79 667 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CELF4Q9BZC1 486 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 LRRC27Q9C0I9 530 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 NUP62CLQ9H1M0 184 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 HIPK3Q9H422 1215 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 MINDY3Q9H8M7 445 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 AKTIPQ9H8T0 292 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 C17orf75Q9HAS0 396 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 IFT122Q9HBG6 1241 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 PARVGQ9HBI0 331 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 OLFML3Q9NRN5 406 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 PANK4Q9NVE7 773 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 ARHGAP28Q9P2N2 729 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 GPN3Q9UHW5 284 aaPredicted RBP5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 MAN1B1Q9UKM7 699 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 EFR3BQ9Y2G0 817 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 CDY2AQ9Y6F7 541 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 PDE4DIPQ5VU43 2346 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 ARID2Q68CP9 1835 aa5.71□□□□□ -1.5
HERPUD1-207ENST00000563781 LOC100289279A0A1B0GTE1 492 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 LRRIQ4A6NIV6 560 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 SLC16A4O15374 487 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 ASAP2O43150 1006 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 NBNO60934 754 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 CSDE1O75534 798 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 ALX3O95076 343 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 DLGAP3O95886 979 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 CYP11A1P05108 521 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 RPLP2P05387 115 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 IQCF3P0C7M6 154 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 SRGAP2CP0DJJ0 459 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 MYBP10242 640 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 GHRP10912 638 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 FGFR4P22455 802 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 MAOBP27338 520 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 NOS3P29474 1203 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 NMT1P30419 496 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 CYP2C18P33260 490 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 HOXD13P35453 343 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 EIF4A3P38919 411 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 THPOP40225 353 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 GATA4P43694 442 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 MBTD1Q05BQ5 628 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 PPP2R3AQ06190 1150 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 POU5F1BQ06416 359 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 STK4Q13043 487 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 DMP1Q13316 513 aaPredicted RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 BFSP2Q13515 415 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 LPIN1Q14693 890 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 PPP2R5AQ15172 486 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 TCTN1Q2MV58 587 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 HERC4Q5GLZ8 1057 aaPredicted RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 FBXO47Q5MNV8 452 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 FAM26FQ5R3K3 315 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 ODR4Q5SWX8 454 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 CAVIN1Q6NZI2 390 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 EPM2AIP1Q7L775 607 aaPredicted RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 RSPH3Q86UC2 560 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 FAM228AQ86W67 206 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 C7orf61Q8IZ16 206 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 MYCT1Q8N699 235 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 DEPTORQ8TB45 409 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 SMARCE1Q969G3 411 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 SCLYQ96I15 445 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 EAF1Q96JC9 268 aaPredicted RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 PKNOX2Q96KN3 472 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 IFT74Q96LB3 600 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 NLRP4Q96MN2 994 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 TMEM74Q96NL1 305 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 GSDMAQ96QA5 445 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 NTPCRQ9BSD7 190 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 HTATIP2Q9BUP3 242 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 NFKBIZQ9BYH8 718 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 CEP44Q9C0F1 390 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 IKZF4Q9H2S9 585 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 FZD8Q9H461 694 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 ST6GALNAC4Q9H4F1 302 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 ZHX3Q9H4I2 956 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 AGO3Q9H9G7 860 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 ERVK-5Q9HDB9 667 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 KMT5AQ9NQR1 393 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 EXOC1Q9NV70 894 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 TBC1D7Q9P0N9 293 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 LARSQ9P2J5 1176 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 SEL1LQ9UBV2 794 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 GDAQ9Y2T3 454 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 NOC2LQ9Y3T9 749 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 PHLPP2Q6ZVD8 1323 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 WDR81Q562E7 1941 aa5.7□□□□□ -1.5
HERPUD1-207ENST00000563781 ZMYM2Q9UBW7 1377 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 DENND3A2RUS2 1198 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 MEGF11A6BM72 1044 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms