RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CDK5RAP2Q96SN8 1893 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 LRRIQ4A6NIV6 560 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 SNUPNO95149 360 aaKnown RBP12.48□□□□□ -0.41
ABCA3-203ENST00000563623 MMP10P09238 476 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 ADRA1DP25100 572 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 CPA2P48052 419 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 PSMC5P62195 406 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 TNFAIP8L3Q5GJ75 292 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 ARHGEF16Q5VV41 709 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 ARMCX6Q7L4S7 300 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 RHPN2Q8IUC4 686 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 CTAGE3PQ8IX95 158 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 IQCGQ9H095 443 aaKnown RBP12.48□□□□□ -0.41
ABCA3-203ENST00000563623 PICK1Q9NRD5 415 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 ATP9AO75110 1047 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 TJP3O95049 919 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 TCF4P15884 667 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 CALB2P22676 271 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 GPC3P51654 580 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 RPL7AP62424 266 aaKnown RBP12.47□□□□□ -0.41
ABCA3-203ENST00000563623 EFTUD2Q15029 972 aaKnown RBP eCLIP12.47□□□□□ -0.41
ABCA3-203ENST00000563623 DLGAP5Q15398 846 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 SMTNL2Q2TAL5 461 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 DACT2Q5SW24 774 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 CEP128Q6ZU80 1094 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 MAB21L3Q8N8X9 362 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 MCEEQ96PE7 176 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 RMDN3Q96TC7 470 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 IMPG2Q9BZV3 1241 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 PRKAG3Q9UGI9 489 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 TMX2Q9Y320 296 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 ADGRA3Q8IWK6 1321 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 TP73O15350 636 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 GYG2O15488 501 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 CD19P15391 556 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 CTCFP49711 727 aaPredicted RBP12.47□□□□□ -0.41
ABCA3-203ENST00000563623 BASP1P80723 227 aaKnown RBP12.47□□□□□ -0.41
ABCA3-203ENST00000563623 NR1H3Q13133 447 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 DNAJC24Q6P3W2 148 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 SCARA5Q6ZMJ2 495 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 CCDC97Q96F63 343 aaPredicted RBP12.47□□□□□ -0.41
ABCA3-203ENST00000563623 ZFATQ9P243 1243 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 COL16A1Q07092 1604 aaPredicted RBP12.47□□□□□ -0.41
ABCA3-203ENST00000563623 NHSQ6T4R5 1651 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 HAUS5O94927 633 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 MUTP22033 750 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 DSG3P32926 999 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 MDH1BQ5I0G3 518 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 ZCCHC9Q8N567 271 aaKnown RBP12.47□□□□□ -0.41
ABCA3-203ENST00000563623 TMEM161BQ8NDZ6 487 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 STK32AQ8WU08 396 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 ZNF75CPQ92670 426 aaPredicted RBP12.47□□□□□ -0.41
ABCA3-203ENST00000563623 UTP4Q969X6 686 aaKnown RBP12.47□□□□□ -0.41
ABCA3-203ENST00000563623 SYNCQ9H7C4 482 aa12.47□□□□□ -0.41
ABCA3-203ENST00000563623 AGO4Q9HCK5 861 aaKnown RBP12.47□□□□□ -0.41
ABCA3-203ENST00000563623 WDR64B1ANS9 1081 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 FDX1P10109 184 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 YWHAGP61981 247 aaKnown RBP eCLIP12.46□□□□□ -0.41
ABCA3-203ENST00000563623 TFDP1Q14186 410 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 RCN2Q14257 317 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 HIF1AQ16665 826 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 SWSAP1Q6NVH7 229 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 CCDC62Q6P9F0 684 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 C3orf62Q6ZUJ4 267 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 OTOAQ7RTW8 1153 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 FAM160B2Q86V87 743 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 CDAN1Q8IWY9 1227 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 OGFOD1Q8N543 542 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
ABCA3-203ENST00000563623 RBBP8NLQ8NC74 664 aaPredicted RBP12.46□□□□□ -0.41
ABCA3-203ENST00000563623 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.41
ABCA3-203ENST00000563623 C7orf43Q8WVR3 580 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 BSNDQ8WZ55 320 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 DDX1Q92499 740 aaKnown RBP12.46□□□□□ -0.41
ABCA3-203ENST00000563623 HEY2Q9UBP5 337 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 LGALS13Q9UHV8 139 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 SMG5Q9UPR3 1016 aaKnown RBP12.46□□□□□ -0.41
ABCA3-203ENST00000563623 IVNS1ABPQ9Y6Y0 642 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 KAT6AQ92794 2004 aa12.46□□□□□ -0.41
ABCA3-203ENST00000563623 ASTN2O75129 1339 aaPredicted RBP12.46□□□□□ -0.42
ABCA3-203ENST00000563623 DNALI1O14645 258 aaPredicted RBP12.46□□□□□ -0.42
ABCA3-203ENST00000563623 ZBED4O75132 1171 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 ASMTLO95671 621 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 MT-ND3P03897 115 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 SPP2Q13103 211 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 DGKZQ13574 1117 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 TMEM154Q6P9G4 183 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 ASRGL1Q7L266 308 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 ZC3H18Q86VM9 953 aaKnown RBP12.46□□□□□ -0.42
ABCA3-203ENST00000563623 DNAJC9Q8WXX5 260 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 MAML1Q92585 1016 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 TTC25Q96NG3 672 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 STRA6Q9BX79 667 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 TMEM39BQ9GZU3 492 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 PSMC3IPQ9P2W1 217 aaPredicted RBP12.46□□□□□ -0.42
ABCA3-203ENST00000563623 STARD13Q9Y3M8 1113 aa12.46□□□□□ -0.42
ABCA3-203ENST00000563623 F8VP50 259 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 EDF1O60869 148 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms