RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 TSEN2Q8NCE0 465 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 FAM13CQ8NE31 585 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ZNF333Q96JL9 665 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 AGAP1Q9UPQ3 857 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 MYH8P13535 1937 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 BTN3A3O00478 584 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 C2CD2LO14523 706 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 KRT1P04264 644 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 RARAP10276 462 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 MYL4P12829 197 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ALADP13716 330 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 TXKP42681 527 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 GSSP48637 474 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ZNF200P98182 395 aaPredicted RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 TRAF2Q12933 501 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ALCAMQ13740 583 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 MEI1Q5TIA1 1274 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ZSCAN10Q96SZ4 725 aaPredicted RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 CYP26B1Q9NR63 512 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 AURKCQ9UQB9 309 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 URB2Q14146 1524 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 NDUFB5O43674 189 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 SNAP91O60641 907 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 SNRPA1P09661 255 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 PTENP60484 403 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ABCE1P61221 599 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 PPP2R5DQ14738 602 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 C5orf22Q49AR2 442 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 KRT73Q86Y46 540 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ENDOVQ8N8Q3 282 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 E2F7Q96AV8 911 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 DHRS1Q96LJ7 313 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ZBTB1Q9Y2K1 713 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 CAMSAP1Q5T5Y3 1602 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 SPDYE5A6NIY4 337 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 GOLGA8JA6NMD2 632 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 SNAPC5O75971 98 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ATF4P18848 351 aaPredicted RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 IL13P35225 146 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 TTC39BQ5VTQ0 682 aaPredicted RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 ZNF544Q6NX49 715 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 TAF2Q6P1X5 1199 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 HDAC11Q96DB2 347 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 CORO1BQ9BR76 489 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 C9orf16Q9BUW7 83 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 VPS4AQ9UN37 437 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 RPS6KL1Q9Y6S9 549 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 SNPHO15079 494 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 SRP72O76094 671 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 SEMA3DO95025 777 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 TPBGLP0DKB5 382 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 CYP2C9P11712 490 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 HSPA2P54652 639 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 PDIA2Q13087 525 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 CTTNQ14247 550 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 EGFLAMQ63HQ2 1017 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ANO7Q6IWH7 933 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ANKRD13AQ8IZ07 590 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 CNDP1Q96KN2 507 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 IVNS1ABPQ9Y6Y0 642 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 MAGEC1O60732 1142 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 STARD3NLO95772 234 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 HERVK_113P62684 666 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 LPIN2Q92539 896 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 CGREF1Q99674 301 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 MYO3BQ8WXR4 1341 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 FAM172BPA6NC97 362 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 ITIH1P19827 911 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 OSCP1Q8WVF1 389 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 FKBP14Q9NWM8 211 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 PCDHA4Q9UN74 947 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 PABPC4LP0CB38 370 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 GJA9P57773 515 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 RTP1P59025 263 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 FOLH1Q04609 750 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 SHQ1Q6PI26 577 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 TPH2Q8IWU9 490 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 BIRC8Q96P09 236 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 SLC12A6Q9UHW9 1150 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 CDC42BPAQ5VT25 1732 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 WASLO00401 505 aaPredicted RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 RIPK2O43353 540 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 GJB6O95452 261 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 PABPC1P11940 636 aaKnown RBP6.54□□□□□ -1.36
CLK3-212ENST00000563418 DEPDC1Q5TB30 811 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 MAEAQ7L5Y9 396 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 MAGEB6Q8N7X4 407 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 LRRC20Q8TCA0 184 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 CEP95Q96GE4 821 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 UQCC2Q9BRT2 126 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 EFCAB1Q9HAE3 211 aa6.54□□□□□ -1.36
CLK3-212ENST00000563418 H0YCG3 227 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 ABCB1P08183 1280 aaPredicted RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 DLATP10515 647 aaKnown RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 CYP7A1P22680 504 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 GNL1P36915 607 aaPredicted RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 GPD2P43304 727 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 SERPINH1P50454 418 aaKnown RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 RABL6Q3YEC7 729 aaPredicted RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 MFSD5Q6N075 450 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms