RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 VWA3AA6NCI4 1184 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 TMEM189-UBE2V1I3L0A0 370 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 SLC16A4O15374 487 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 ZMYND10O75800 440 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 FGFR3P22607 806 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 ABCG1P45844 678 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 CLCNKBP51801 687 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 SLC12A3P55017 1021 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 DMP1Q13316 513 aaPredicted RBP11.06□□□□□ -0.64
SNX29-202ENST00000563308 PSMD5Q16401 504 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 UPP1Q16831 310 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 TMEM119Q4V9L6 283 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 ARL6IP4Q66PJ3 421 aaKnown RBP11.06□□□□□ -0.64
SNX29-202ENST00000563308 SYT2Q8N9I0 419 aaPredicted RBP11.06□□□□□ -0.64
SNX29-202ENST00000563308 TMEM161BQ8NDZ6 487 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 SPIRE2Q8WWL2 714 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 ZBTB45Q96K62 511 aaPredicted RBP11.06□□□□□ -0.64
SNX29-202ENST00000563308 DRC1Q96MC2 740 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 ZMAT2Q96NC0 199 aaKnown RBP11.06□□□□□ -0.64
SNX29-202ENST00000563308 PLIN2Q99541 437 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 PRKD2Q9BZL6 878 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 GOLGA2P5Q9HBQ8 144 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 KMT5AQ9NQR1 393 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 DAXXQ9UER7 740 aaPredicted RBP11.06□□□□□ -0.64
SNX29-202ENST00000563308 FBXW11Q9UKB1 542 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 SRPK3Q9UPE1 567 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 RBM19Q9Y4C8 960 aaKnown RBP11.06□□□□□ -0.64
SNX29-202ENST00000563308 SPAG17Q6Q759 2223 aa11.06□□□□□ -0.64
SNX29-202ENST00000563308 NPHP3-ACAD11A0A0J9YXS1 232 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 LNP1A1A4G5 178 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 PAPSS2O95340 614 aaPredicted RBP11.05□□□□□ -0.64
SNX29-202ENST00000563308 PLA2G4BP0C869 781 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 MAPTP10636 758 aaKnown RBP11.05□□□□□ -0.64
SNX29-202ENST00000563308 MCF2P10911 925 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 KCNE1P15382 129 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 MCM2P49736 904 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 CREMQ03060 361 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 RAD51AP2Q09MP3 1159 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 ACACAQ13085 2346 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 ZRSR1Q15695 479 aaKnown RBP11.05□□□□□ -0.64
SNX29-202ENST00000563308 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.05□□□□□ -0.64
SNX29-202ENST00000563308 KCTD17Q8N5Z5 321 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 MDM1Q8TC05 714 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 ARID3AQ99856 593 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 TIPINQ9BVW5 301 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 MRPL4Q9BYD3 311 aaKnown RBP11.05□□□□□ -0.64
SNX29-202ENST00000563308 BRD9Q9H8M2 597 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 C17orf75Q9HAS0 396 aa11.05□□□□□ -0.64
SNX29-202ENST00000563308 VWA8A3KMH1 1905 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 H3BQV1 296 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 I3L4J1 428 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 AKAP3O75969 853 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 B3GAT3O94766 335 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 WISP1O95388 367 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 PLS3P13797 630 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 TKTP29401 623 aaKnown RBP11.04□□□□□ -0.64
SNX29-202ENST00000563308 BRCC3P46736 316 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 OSTNP61366 133 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 GRIN1Q05586 938 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 ELAVL2Q12926 359 aaKnown RBP11.04□□□□□ -0.64
SNX29-202ENST00000563308 CUL4AQ13619 759 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 RAB33AQ14088 237 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 ZNF568Q3ZCX4 644 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 MPZL3Q6UWV2 235 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 CEP57Q86XR8 500 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 FGF13Q92913 245 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 KCNN1Q92952 543 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 C18orf25Q96B23 403 aaPredicted RBP11.04□□□□□ -0.64
SNX29-202ENST00000563308 UROC1Q96N76 676 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 HAPLN2Q9GZV7 340 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 BLOC1S4Q9NUP1 217 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 CNTN3Q9P232 1028 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 MTRRQ9UBK8 725 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 SMC3Q9UQE7 1217 aa11.04□□□□□ -0.64
SNX29-202ENST00000563308 K7ESF4 209 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 TOM1L1O75674 476 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 HNRNPA1P09651 372 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNX29-202ENST00000563308 HOXA6P31267 233 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 OR1D2P34982 312 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 NTHL1P78549 312 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 CACNB1Q02641 598 aaPredicted RBP11.03□□□□□ -0.64
SNX29-202ENST00000563308 SLC10A6Q3KNW5 377 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 SEZ6Q53EL9 994 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
SNX29-202ENST00000563308 GRASPQ7Z6J2 395 aaPredicted RBP11.03□□□□□ -0.64
SNX29-202ENST00000563308 TMEM130Q8N3G9 435 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 FAM200AQ8TCP9 573 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 IRF7Q92985 503 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 DDX27Q96GQ7 796 aaKnown RBP11.03□□□□□ -0.64
SNX29-202ENST00000563308 ZC3H10Q96K80 434 aaKnown RBP11.03□□□□□ -0.64
SNX29-202ENST00000563308 CCDC94Q9BW85 323 aaPredicted RBP11.03□□□□□ -0.64
SNX29-202ENST00000563308 TOPORSQ9NS56 1045 aaPredicted RBP11.03□□□□□ -0.64
SNX29-202ENST00000563308 KCND2Q9NZV8 630 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 POLIQ9UNA4 740 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 BACE2Q9Y5Z0 518 aa11.03□□□□□ -0.64
SNX29-202ENST00000563308 MTCL1Q9Y4B5 1905 aaKnown RBP11.03□□□□□ -0.64
SNX29-202ENST00000563308 PODXLO00592 558 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 SLC26A4O43511 780 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 ECI2O75521 394 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 C8AP07357 584 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms