RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 GAGE12HA6NDE8 117 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 LEFTY2O00292 366 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 RNASET2O00584 256 aaKnown RBP5.86□□□□□ -1.47
SMG1-206ENST00000562668 LPXNO60711 386 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 NCR1O76036 304 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 LMNAP02545 664 aaKnown RBP5.86□□□□□ -1.47
SMG1-206ENST00000562668 LPLP06858 475 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 ZSCAN20P17040 1043 aaPredicted RBP5.86□□□□□ -1.47
SMG1-206ENST00000562668 BPIP17213 487 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 LGALS4P56470 323 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 SLC39A6Q13433 755 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 ITPK1Q13572 414 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 DHCR24Q15392 516 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 CSRP2Q16527 193 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 BTNL9Q6UXG8 535 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 ABHD15Q6UXT9 468 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 PLXDC1Q8IUK5 500 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 SYT12Q8IV01 421 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 FAM9BQ8IZU0 186 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 BEND2Q8NDZ0 799 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 ZNF480Q8WV37 535 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 USP7Q93009 1102 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 PAWRQ96IZ0 340 aaKnown RBP5.86□□□□□ -1.47
SMG1-206ENST00000562668 AKIP1Q9NQ31 210 aa5.86□□□□□ -1.47
SMG1-206ENST00000562668 C4AP0C0L4 1744 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 TMEM200CA6NKL6 621 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 DIRC3C9JPN6 131 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 CHL1O00533 1208 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 MYCLP1P12525 358 aaPredicted RBP5.85□□□□□ -1.47
SMG1-206ENST00000562668 TGM1P22735 817 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 CTSSP25774 331 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 MGAT1P26572 445 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 RNASE9P60153 205 aaKnown RBP5.85□□□□□ -1.47
SMG1-206ENST00000562668 NHLH2Q02577 135 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 CT83Q5H943 113 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 ZNF790Q6PG37 636 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 Q6YL49 198 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 PDZD4Q76G19 769 aaPredicted RBP5.85□□□□□ -1.47
SMG1-206ENST00000562668 GPR150Q8NGU9 434 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 MDM1Q8TC05 714 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 TOR3AQ9H497 397 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 GPRC5DQ9NZD1 345 aa5.85□□□□□ -1.47
SMG1-206ENST00000562668 GASTP01350 101 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 CRHR1P34998 444 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 PDCD1Q15116 288 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 TAF7Q15545 349 aaPredicted RBP5.84□□□□□ -1.47
SMG1-206ENST00000562668 BEAN1Q3B7T3 259 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 ANKS6Q68DC2 871 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 NPM2Q86SE8 214 aaKnown RBP5.84□□□□□ -1.47
SMG1-206ENST00000562668 ARHGEF19Q8IW93 802 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 RNF169Q8NCN4 708 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 TFAP2CQ92754 450 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 SERHL2Q9H4I8 314 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 CYP4F11Q9HBI6 524 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 TOPORSQ9NS56 1045 aaPredicted RBP5.84□□□□□ -1.47
SMG1-206ENST00000562668 BABAM1Q9NWV8 329 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 MIS18AQ9NYP9 233 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 ANKFY1Q9P2R3 1169 aa5.84□□□□□ -1.47
SMG1-206ENST00000562668 CCNL1Q9UK58 526 aaPredicted RBP5.84□□□□□ -1.47
SMG1-206ENST00000562668 APOBEC2Q9Y235 224 aaKnown RBP5.84□□□□□ -1.47
SMG1-206ENST00000562668 PCSK5Q92824 1860 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 IL16Q14005 1332 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 ULK1O75385 1050 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 SPATA31D3P0C874 917 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 RBP3P10745 1247 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 CYP19A1P11511 503 aaPredicted RBP5.83□□□□□ -1.48
SMG1-206ENST00000562668 SESN3P58005 492 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 EIF4A1P60842 406 aaKnown RBP5.83□□□□□ -1.48
SMG1-206ENST00000562668 TAP1Q03518 808 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 LMOD3Q0VAK6 560 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 TEFQ10587 303 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 SLC15A2Q16348 729 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 FSCN1Q16658 493 aaKnown RBP5.83□□□□□ -1.48
SMG1-206ENST00000562668 UGT8Q16880 541 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMG1-206ENST00000562668 MST1LQ2TV78 715 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 TAF7LQ5H9L4 462 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 PRAMEF14Q5SWL7 426 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 EFCAB12Q6NXP0 572 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 SPATA31D4Q6ZUB0 917 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 CLRN3Q8NCR9 226 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 CEP95Q96GE4 821 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 ACAP3Q96P50 834 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 IFT22Q9H7X7 185 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 BCORQ6W2J9 1755 aa5.83□□□□□ -1.48
SMG1-206ENST00000562668 COL4A3Q01955 1670 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 PNPLA7Q6ZV29 1317 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.82□□□□□ -1.48
SMG1-206ENST00000562668 TBKBP1A7MCY6 615 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 NEMP1O14524 444 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 NDUFA10O95299 355 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 NUDT3O95989 172 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 ENPP1P22413 925 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 CANXP27824 592 aaKnown RBP5.82□□□□□ -1.48
SMG1-206ENST00000562668 BMPR1AP36894 532 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 FLT3LGP49771 235 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 BMT2Q1RMZ1 405 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 KRT24Q2M2I5 525 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 PDCD4Q53EL6 469 aaKnown RBP5.82□□□□□ -1.48
SMG1-206ENST00000562668 DPY19L2P1Q6NXN4 242 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms