RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 A0A1W2PQC6 194 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 AKAP10O43572 662 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 RHOBTB1O94844 696 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 THPOP40225 353 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 STX3Q13277 289 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 CDC42EP5Q6NZY7 148 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 C11orf74Q86VG3 221 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 IFNEQ86WN2 208 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 PCMTD2Q9NV79 361 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 PRR12Q9ULL5 1215 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 ENO3P13929 434 aaPredicted RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 SERPINB4P48594 390 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 SEMA3FQ13275 785 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 CYTH1Q15438 398 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 EFHC1Q5JVL4 640 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 OPTNQ96CV9 577 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 NYAP2Q9P242 653 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 TBC1D4O60343 1298 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 ALOX15P16050 662 aaPredicted RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 PSMA3P25788 255 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 SERPINB10P48595 397 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 FMO5P49326 533 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 RABGAP1LQ5R372 815 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 CYP4A22Q5TCH4 519 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 HORMAD1Q86X24 394 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 CATSPER1Q8NEC5 780 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 CHST13Q8NET6 341 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 UCMAQ8WVF2 138 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 GCC2Q8IWJ2 1684 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 PRR23D1E9PI22 279 aaPredicted RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 PRR23D2P0DMB1 279 aaPredicted RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 MLNP12872 115 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 GPD1P21695 349 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 NBPF9Q3BBW0 867 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 ATP6V0D2Q8N8Y2 350 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 VPS37AQ8NEZ2 397 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 INPP5DQ92835 1189 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 PRPF18Q99633 342 aaKnown RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 ATP1A1P05023 1023 aaKnown RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 WEE2P0C1S8 567 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 ODC1P11926 461 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 DARSP14868 501 aaKnown RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 ZNF177Q13360 481 aaPredicted RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 LAMC2Q13753 1193 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 TRIM60Q495X7 471 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 KRT78Q8N1N4 520 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 TADA1Q96BN2 335 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 FOXN1O15353 648 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 HLA-DRAP01903 254 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 SLC9A1P19634 815 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 SPRP35270 261 aaPredicted RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 PLA2G4AP47712 749 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 TAF6P49848 677 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 RAD23BP54727 409 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 PTK6Q13882 451 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 NDEL1Q9GZM8 345 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 DDX28Q9NUL7 540 aaKnown RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 ZNF229Q9UJW7 825 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 SCAF8Q9UPN6 1271 aaKnown RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 CDYLQ9Y232 598 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 ANKRD65E5RJM6 399 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 LZTS3O60299 673 aaPredicted RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 PGK2P07205 417 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 TRPC1P48995 793 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 SLC11A2P49281 568 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 ZNF200P98182 395 aaPredicted RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 CLEC10AQ8IUN9 316 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 DIS3LQ8TF46 1054 aaKnown RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 FAM151AQ8WW52 585 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 RBM15Q96T37 977 aaKnown RBP eCLIP11.75□□□□□ -0.539e-7■■■□□ 18.2
RPAP1-204ENST00000562303 TSEN34Q9BSV6 310 aaKnown RBP11.75□□□□□ -0.53
RPAP1-204ENST00000562303 MYOZ2Q9NPC6 264 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 RFX7Q2KHR2 1363 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 H7C4K7 107 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 FOXP2O15409 715 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 POLBP06746 335 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 GUCY1A2P33402 732 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 RFX3P48380 749 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 BTNL9Q6UXG8 535 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 ADCK1Q86TW2 530 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 SGMS1Q86VZ5 419 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 ANKRD13AQ8IZ07 590 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 KCND2Q9NZV8 630 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 PHF2O75151 1096 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 E2F4Q16254 413 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 PRUNE1Q86TP1 453 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 JADE3Q92613 823 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 RIC8BQ9NVN3 520 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 SPACA6W5XKT8 324 aa11.75□□□□□ -0.53
RPAP1-204ENST00000562303 SYNMO15061 1565 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 DCDC2CA8MYV0 355 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 STX7O15400 261 aaKnown RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 MAFGO15525 162 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 RGS2P41220 211 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms