RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 USP51Q70EK9 711 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 UBE3BQ7Z3V4 1068 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 ZFP28Q8NHY6 868 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 ZNF483Q8TF39 744 aaPredicted RBP7.76□□□□□ -1.17
SMG1-204ENST00000561940 SLC25A43Q8WUT9 341 aaPredicted RBP7.76□□□□□ -1.17
SMG1-204ENST00000561940 NEU4Q8WWR8 484 aaPredicted RBP7.76□□□□□ -1.17
SMG1-204ENST00000561940 P2RX7Q99572 595 aaKnown RBP7.76□□□□□ -1.17
SMG1-204ENST00000561940 MYD88Q99836 296 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 LRRC27Q9C0I9 530 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 NLRC4Q9NPP4 1024 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 GPRC5BQ9NZH0 403 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 CPNE7Q9UBL6 633 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 CLCA2Q9UQC9 943 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 KIAA0391O15091 583 aaKnown RBP7.75□□□□□ -1.17
SMG1-204ENST00000561940 TEX33O43247 280 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 ATP5JP18859 108 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 PIK3CGP48736 1102 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 CHN2P52757 468 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 CREMQ03060 361 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 PABPC1LQ4VXU2 614 aaKnown RBP7.75□□□□□ -1.17
SMG1-204ENST00000561940 DACT2Q5SW24 774 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 ZNF529Q6P280 563 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 TOGARAM2Q6ZUX3 1019 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 SEM1Q6ZVN7 128 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 MED25Q71SY5 747 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 FAM186BQ8IYM0 893 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 PHKBQ93100 1093 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 MYH16Q9H6N6 1097 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 SARS2Q9NP81 518 aaKnown RBP7.75□□□□□ -1.17
SMG1-204ENST00000561940 STK32BQ9NY57 414 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.75□□□□□ -1.17
SMG1-204ENST00000561940 DMTF1Q9Y222 760 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 USP15Q9Y4E8 981 aaPredicted RBP7.75□□□□□ -1.17
SMG1-204ENST00000561940 SNX13Q9Y5W8 968 aa7.75□□□□□ -1.17
SMG1-204ENST00000561940 PRSS29PA6NIE9 313 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 DRGXA6NNA5 263 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 SNRPA1P09661 255 aaKnown RBP7.74□□□□□ -1.17
SMG1-204ENST00000561940 BRAFP15056 766 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 ZKSCAN1P17029 563 aaPredicted RBP7.74□□□□□ -1.17
SMG1-204ENST00000561940 CASP5P51878 434 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 SOX8P57073 446 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 ABHD18Q0P651 414 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 IFIT5Q13325 482 aaKnown RBP7.74□□□□□ -1.17
SMG1-204ENST00000561940 CCDC93Q567U6 631 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 DRICH1Q6PGQ1 229 aaPredicted RBP7.74□□□□□ -1.17
SMG1-204ENST00000561940 GDF7Q7Z4P5 450 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 SGCZQ96LD1 299 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 RIPOR3Q96MK2 946 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 BTBD1Q9H0C5 482 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 FBXO34Q9NWN3 711 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 SRRDQ9UH36 339 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 SLC45A2Q9UMX9 530 aa7.74□□□□□ -1.17
SMG1-204ENST00000561940 RASA4BC9J798 803 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 F8W8V4 182 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 TRIM24O15164 1050 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 PJA2O43164 708 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 RASA4O43374 803 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 SLPIP03973 132 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 MCM7P33993 719 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 SUMO3P55854 103 aaPredicted RBP7.73□□□□□ -1.17
SMG1-204ENST00000561940 PDCD4Q53EL6 469 aaKnown RBP7.73□□□□□ -1.17
SMG1-204ENST00000561940 SESTD1Q86VW0 696 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 LIX1LQ8IVB5 337 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 PCSK9Q8NBP7 692 aaKnown RBP7.73□□□□□ -1.17
SMG1-204ENST00000561940 HAS1Q92839 578 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 CCDC138Q96M89 665 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 KIAA1586Q9HCI6 787 aa7.73□□□□□ -1.17
SMG1-204ENST00000561940 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMG1-204ENST00000561940 NCK2O43639 380 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 NCR1O76036 304 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 MAKP20794 623 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 SLC6A2P23975 617 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 MGAT1P26572 445 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 ZFP36P26651 326 aaKnown RBP7.72□□□□□ -1.17
SMG1-204ENST00000561940 FMO1Q01740 532 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 FHL2Q14192 279 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 CNGA2Q16280 664 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 SMC5Q8IY18 1101 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 DCLRE1CQ96SD1 692 aaKnown RBP7.72□□□□□ -1.17
SMG1-204ENST00000561940 NEU1Q99519 415 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 TRIM54Q9BYV2 358 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 ZNF287Q9HBT7 754 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 PTPRHQ9HD43 1115 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 PLCB1Q9NQ66 1216 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 CNNM1Q9NRU3 951 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 PIH1D1Q9NWS0 290 aaKnown RBP7.72□□□□□ -1.17
SMG1-204ENST00000561940 OGDHLQ9ULD0 1010 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 MAP3K2Q9Y2U5 619 aa7.72□□□□□ -1.17
SMG1-204ENST00000561940 NDUFA10O95299 355 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 POMCP01189 267 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 ADH4P08319 380 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 EN2P19622 333 aaPredicted RBP7.71□□□□□ -1.18
SMG1-204ENST00000561940 TNFSF4P23510 183 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 NOMO3P69849 1222 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 ZNF543Q08ER8 600 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 UBXN2BQ14CS0 331 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 ATP2B3Q16720 1220 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 C3orf38Q5JPI3 329 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 FAM102AQ5T9C2 384 aaPredicted RBP7.71□□□□□ -1.18
SMG1-204ENST00000561940 TSHZ3Q63HK5 1081 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms