RNA–Protein interactions for RNA: ENST00000561527.5

AC010542.3-201, humanhuman

TSL 4

Gene AC010542.3, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-201ENST00000561527 POLR2BP30876 1174 aaKnown RBP17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 PNPLA4P41247 253 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 ASPAP45381 313 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 C1QBPQ07021 282 aaKnown RBP17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 PTGISQ16647 500 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 XKR4Q5GH76 650 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 TEX35Q5T0J7 233 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 PALB2Q86YC2 1186 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 PHF13Q86YI8 300 aaPredicted RBP17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 CREG2Q8IUH2 290 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 MCOLN2Q8IZK6 566 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 USP38Q8NB14 1042 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 TMEM35BQ8NCS4 154 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 CXorf38Q8TB03 319 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 EIF2AQ9BY44 585 aaKnown RBP17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 MRPL47Q9HD33 250 aaKnown RBP17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 ABCB6Q9NP58 842 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 NXF1Q9UBU9 619 aaKnown RBP17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 UMODL1Q5DID0 1318 aa17.13■□□□□ 0.33
AC010542.3-201ENST00000561527 FTCDO95954 541 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 CALB1P05937 261 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 EN2P19622 333 aaPredicted RBP17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 ITGA7Q13683 1181 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 STILQ15468 1287 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 ELF2Q15723 593 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 TWF2Q6IBS0 349 aaKnown RBP17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 NT5DC3Q86UY8 548 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 FAM228AQ86W67 206 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 MSANTD4Q8NCY6 345 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 TMEM40Q8WWA1 233 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 ARHGEF26Q96DR7 871 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 GLT1D1Q96MS3 346 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 SENP6Q9GZR1 1112 aaPredicted RBP17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 CNOT8Q9UFF9 292 aaKnown RBP17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 PARP2Q9UGN5 583 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 NOD1Q9Y239 953 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 STXBP5LQ9Y2K9 1186 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 NOC2LQ9Y3T9 749 aaKnown RBP17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 SCINQ9Y6U3 715 aa17.12■□□□□ 0.33
AC010542.3-201ENST00000561527 MEFVO15553 781 aaPredicted RBP17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 BUB1BO60566 1050 aaPredicted RBP17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 SRGAP2O75044 1071 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 RECQL4O94761 1208 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 WEE2P0C1S8 567 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 FAM163BP0C2L3 166 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 SKIP12755 728 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 CD58P19256 250 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 RAB27AP51159 221 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 ACLYP53396 1101 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 NOMO3P69849 1222 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 FAM26DQ5JW98 314 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 UBXN11Q5T124 520 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 PDCL2Q8N4E4 241 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 UBL4BQ8N7F7 174 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 ZNF564Q8TBZ8 553 aaPredicted RBP17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 ELMO3Q96BJ8 720 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 CYFIP2Q96F07 1278 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 HES6Q96HZ4 224 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 CAPZA3Q96KX2 299 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 ZNF560Q96MR9 790 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 WNT8AQ9H1J5 351 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 LHX5Q9H2C1 402 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 OSGEPQ9NPF4 335 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 ACP6Q9NPH0 428 aa17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 BARX2Q9UMQ3 279 aaPredicted RBP17.11■□□□□ 0.33
AC010542.3-201ENST00000561527 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 VDRP11473 427 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 GRK4P32298 578 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 CDH5P33151 784 aaPredicted RBP17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 SLC1A1P43005 524 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 TAP1Q03518 808 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 MGAT3Q09327 533 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 INCA1Q0VD86 236 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 NAA35Q5VZE5 725 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 MMGT1Q8N4V1 131 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 PPP1R13LQ8WUF5 828 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 RUBCNQ92622 972 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 TMEM176AQ96HP8 235 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 MMS19Q96T76 1030 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 NAP1L3Q99457 506 aaPredicted RBP17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 NUP85Q9BW27 656 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 TRAIPQ9BWF2 469 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 MIS12Q9H081 205 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 NXF3Q9H4D5 531 aaKnown RBP17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 SLC38A7Q9NVC3 462 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 ADAM22Q9P0K1 906 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 ST3GAL5Q9UNP4 418 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 IPPQ9Y573 584 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 V9GYY5 206 aaPredicted RBP17.1■□□□□ 0.33
AC010542.3-201ENST00000561527 SMIM28A0A1B0GU29 152 aa17.09■□□□□ 0.33
AC010542.3-201ENST00000561527 KCNK3O14649 394 aa17.09■□□□□ 0.33
AC010542.3-201ENST00000561527 NCK2O43639 380 aa17.09■□□□□ 0.33
AC010542.3-201ENST00000561527 CILPO75339 1184 aa17.09■□□□□ 0.33
AC010542.3-201ENST00000561527 INHAP05111 366 aa17.09■□□□□ 0.33
AC010542.3-201ENST00000561527 THPOP40225 353 aa17.09■□□□□ 0.33
AC010542.3-201ENST00000561527 CAP1Q01518 475 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms