RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 RABGGTBP53611 331 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 FANCCQ00597 558 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 RNASELQ05823 741 aaKnown RBP12.51□□□□□ -0.41
HERC1-214ENST00000561400 GPS2Q13227 327 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 HHATQ5VTY9 493 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 CACTINQ8WUQ7 758 aaKnown RBP12.51□□□□□ -0.41
HERC1-214ENST00000561400 RABGGTAQ92696 567 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 ANKRD36BP1Q96IX9 119 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 NRDE2Q9H7Z3 1164 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 TMEM8AQ9HCN3 771 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 SLC38A7Q9NVC3 462 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 SIX4Q9UIU6 781 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 INSL6Q9Y581 213 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 LCHNA4D1U4 455 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 CASTOR2A6NHX0 329 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 PPEF2O14830 753 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 SNUPNO95149 360 aaKnown RBP12.5□□□□□ -0.41
HERC1-214ENST00000561400 VNN1O95497 513 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 TNNC2P02585 160 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 ITGB3P05106 788 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 GTF2H1P32780 548 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 MXI1P50539 228 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 BTG3Q14201 252 aaPredicted RBP12.5□□□□□ -0.41
HERC1-214ENST00000561400 KRT39Q6A163 491 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 COLGALT2Q8IYK4 626 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 BEST2Q8NFU1 509 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 GIMAP7Q8NHV1 300 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 C17orf50Q8WW18 174 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 RAD9AQ99638 391 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 MRPL9Q9BYD2 267 aaKnown RBP12.5□□□□□ -0.41
HERC1-214ENST00000561400 CWH43Q9H720 699 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 NLRC5Q86WI3 1866 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 CHD7Q9P2D1 2997 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 TLL1O43897 1013 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 SERPINC1P01008 464 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 CYP3A5P20815 502 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 CLCNKBP51801 687 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 AP3M2P53677 418 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 TUSC3Q13454 348 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 BIRC3Q13489 604 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 CMTR2Q8IYT2 770 aaKnown RBP12.5□□□□□ -0.41
HERC1-214ENST00000561400 TDHQ8IZJ6 230 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
HERC1-214ENST00000561400 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 TAS1R2Q8TE23 839 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 ELMO3Q96BJ8 720 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 YIPF2Q9BWQ6 316 aa12.5□□□□□ -0.41
HERC1-214ENST00000561400 ANO9A1A5B4 782 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 XPOTO43592 962 aaKnown RBP12.49□□□□□ -0.41
HERC1-214ENST00000561400 STX10O60499 249 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 ZC3H11AO75152 810 aaKnown RBP eCLIP12.49□□□□□ -0.41
HERC1-214ENST00000561400 AP1G2O75843 785 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 FAM200BP0CF97 657 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 MYOGP15173 224 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 LRPAP1P30533 357 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 POLR2BP30876 1174 aaKnown RBP12.49□□□□□ -0.41
HERC1-214ENST00000561400 PBX3P40426 434 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 C9orf57Q5W0N0 161 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 ARMC2Q8NEN0 867 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
HERC1-214ENST00000561400 SEMA4DQ92854 862 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 PLEKHG4BQ96PX9 1271 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 ITGA11Q9UKX5 1188 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 COQ4Q9Y3A0 265 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 MRPL42Q9Y6G3 142 aaKnown RBP12.49□□□□□ -0.41
HERC1-214ENST00000561400 A0A1B0GTH6 734 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 LGALS16A8MUM7 142 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 F8W810 466 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 PIRO00625 290 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 TEX33O43247 280 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 KRT19P08727 400 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 LINC00271P0C7V0 271 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 MYL7Q01449 175 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 UPP1Q16831 310 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 C16orf87Q6PH81 154 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 C3orf58Q8NDZ4 430 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 FAM193BQ96PV7 902 aaPredicted RBP12.49□□□□□ -0.41
HERC1-214ENST00000561400 IFNKQ9P0W0 207 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 AGAP1Q9UPQ3 857 aa12.49□□□□□ -0.41
HERC1-214ENST00000561400 EIF3CLB5ME19 914 aaKnown RBP12.48□□□□□ -0.41
HERC1-214ENST00000561400 PMM2O15305 246 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 PHACTR2O75167 634 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 ARHGEF15O94989 841 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 HLA-DRAP01903 254 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 ELF1P32519 619 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 UBASH3AP57075 661 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 NCOA4Q13772 614 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 NR1I3Q14994 352 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 EPC2Q52LR7 807 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 FBXL13Q8NEE6 735 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 LMO3Q8TAP4 145 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 EIF3CQ99613 913 aaKnown RBP12.48□□□□□ -0.41
HERC1-214ENST00000561400 PI4K2AQ9BTU6 479 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 XYLT2Q9H1B5 865 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 LMCD1Q9NZU5 365 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 TRIOBPQ9H2D6 2365 aa12.48□□□□□ -0.41
HERC1-214ENST00000561400 NT5C1B-RDH14C9J2C7 533 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms