RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ADAM9Q13443 819 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 STIM1Q13586 685 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 RAB33AQ14088 237 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 ZNF658Q5TYW1 1059 aaPredicted RBP10.9□□□□□ -0.66
HERC1-212ENST00000561348 RNF19BQ6ZMZ0 732 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 CCDC149Q6ZUS6 474 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 GET4Q7L5D6 327 aaPredicted RBP10.9□□□□□ -0.66
HERC1-212ENST00000561348 TRAPPC11Q7Z392 1133 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 GRASPQ7Z6J2 395 aaPredicted RBP10.9□□□□□ -0.66
HERC1-212ENST00000561348 GPR149Q86SP6 731 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 CREBRFQ8IUR6 639 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 WDR49Q8IV35 697 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 GUF1Q8N442 669 aaKnown RBP10.9□□□□□ -0.66
HERC1-212ENST00000561348 FAM200AQ8TCP9 573 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 ELMO3Q96BJ8 720 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 HPDLQ96IR7 371 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 TIGD1Q96MW7 591 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 NECTIN4Q96NY8 510 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 GSDMAQ96QA5 445 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 TMEM209Q96SK2 561 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 CGRRF1Q99675 332 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 KCTD10Q9H3F6 313 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 NXF1Q9UBU9 619 aaKnown RBP10.9□□□□□ -0.66
HERC1-212ENST00000561348 ITGA11Q9UKX5 1188 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 SLC27A5Q9Y2P5 690 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 BACE2Q9Y5Z0 518 aa10.9□□□□□ -0.66
HERC1-212ENST00000561348 M0QZQ0 153 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 XYLBO75191 536 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 KRT13P13646 458 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 ACAT1P24752 427 aaKnown RBP10.89□□□□□ -0.67
HERC1-212ENST00000561348 PNPLA4P41247 253 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 DLG4P78352 724 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 NTHL1P78549 312 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 POU5F1Q01860 360 aaKnown RBP10.89□□□□□ -0.67
HERC1-212ENST00000561348 PSMD6Q15008 389 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 SLC39A12Q504Y0 691 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 LILRA6Q6PI73 481 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 GPR65Q8IYL9 337 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 FAM186BQ8IYM0 893 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 TDRD5Q8NAT2 981 aaKnown RBP10.89□□□□□ -0.67
HERC1-212ENST00000561348 ZNF461Q8TAF7 563 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 SUSD6Q92537 303 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 GBP4Q96PP9 640 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 PRKD2Q9BZL6 878 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 PRKAG3Q9UGI9 489 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 LIMD1Q9UGP4 676 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 MUTYHQ9UIF7 546 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 FBXW11Q9UKB1 542 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 MAN1B1Q9UKM7 699 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 DSEQ9UL01 958 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 NR2E1Q9Y466 385 aa10.89□□□□□ -0.67
HERC1-212ENST00000561348 TRIM49BA6NDI0 452 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 LRRIQ3A6PVS8 624 aaPredicted RBP10.88□□□□□ -0.67
HERC1-212ENST00000561348 C2CD4DB7Z1M9 353 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 GOLGA6L22H0YM25 854 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 CETN3O15182 167 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 SOAT2O75908 522 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 SEC24AO95486 1093 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 CST3P01034 146 aaPredicted RBP10.88□□□□□ -0.67
HERC1-212ENST00000561348 TRIM49P0CI25 452 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 TRIM49CP0CI26 452 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 TYMPP19971 482 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 STX17P56962 302 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 MYL6P60660 151 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 TNNC1P63316 161 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 DUSP4Q13115 394 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 MRPL58Q14197 206 aaKnown RBP10.88□□□□□ -0.67
HERC1-212ENST00000561348 TAF12Q16514 161 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 WDR72Q3MJ13 1102 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 TCERG1LQ5VWI1 586 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 SLC8B1Q6J4K2 584 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 SCARA5Q6ZMJ2 495 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 RNF135Q8IUD6 432 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 C12orf56Q8IXR9 622 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 ELMOD1Q8N336 334 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 ATAD1Q8NBU5 361 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 ING5Q8WYH8 240 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 ACSF2Q96CM8 615 aaPredicted RBP10.88□□□□□ -0.67
HERC1-212ENST00000561348 MFSD14AQ96MC6 490 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 SEPT5Q99719 369 aaPredicted RBP10.88□□□□□ -0.67
HERC1-212ENST00000561348 CORO1BQ9BR76 489 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 HCFC1R1Q9NWW0 138 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 ZDHHC7Q9NXF8 308 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 DDX43Q9NXZ2 648 aaKnown RBP10.88□□□□□ -0.67
HERC1-212ENST00000561348 ABI2Q9NYB9 513 aaPredicted RBP10.88□□□□□ -0.67
HERC1-212ENST00000561348 SIX4Q9UIU6 781 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 CTNND2Q9UQB3 1225 aa10.88□□□□□ -0.67
HERC1-212ENST00000561348 MTCL1Q9Y4B5 1905 aaKnown RBP10.88□□□□□ -0.67
HERC1-212ENST00000561348 C2orf16Q68DN1 1984 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 C5orf42Q9H799 3197 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 OR6C75A6NL08 312 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 PSMA7O14818 248 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 HCRTO43612 131 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 AKAP3O75969 853 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 OAZ2O95190 189 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 ASGR2P07307 311 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 PDGFRBP09619 1106 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 EPB41P11171 864 aaKnown RBP10.87□□□□□ -0.67
HERC1-212ENST00000561348 MYL4P12829 197 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms