RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 NPTX2P47972 431 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 GCLMP48507 274 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 KPNB1Q14974 876 aaKnown RBP14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 NOL9Q5SY16 702 aaKnown RBP14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 CYFIP1Q7L576 1253 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 OTUD6AQ7L8S5 288 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 ARHGEF19Q8IW93 802 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 LRRC8CQ8TDW0 803 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 ATP6V0A1Q93050 837 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 VTI1AQ96AJ9 217 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 PLEKHG4BQ96PX9 1271 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 SGIP1Q9BQI5 828 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 TEX13BQ9BXU2 312 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 MYLK2Q9H1R3 596 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 UBE2TQ9NPD8 197 aaPredicted RBP14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 NMRK1Q9NWW6 199 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 SNX24Q9Y343 169 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 STARD13Q9Y3M8 1113 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 ACTL7BQ9Y614 415 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 GMEB1Q9Y692 573 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 LCTP09848 1927 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 LOC285556D6RIA3 1793 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 WDR90Q96KV7 1748 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 NFASCO94856 1347 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 SYNGAP1Q96PV0 1343 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 ANKRD63C9JTQ0 380 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 LRRN2O75325 713 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 UPP2O95045 317 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 TMEM253P0C7T8 217 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 TNFAIP3P21580 790 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 ADSSP30520 456 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 STX2P32856 288 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 PTGIRP43119 386 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 DMP1Q13316 513 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 LRRC14Q15048 493 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 PABPC1LQ4VXU2 614 aaKnown RBP14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 CGB2Q6NT52 195 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 MAP4K3Q8IVH8 894 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 SPIRE2Q8WWL2 714 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 BSNDQ8WZ55 320 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 CEP170P1Q96L14 293 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 DDX23Q9BUQ8 820 aaKnown RBP14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 KIFC3Q9BVG8 833 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 ACAD9Q9H845 621 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 GGA3Q9NZ52 723 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 GPRC5DQ9NZD1 345 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 TMOD4Q9NZQ9 345 aa14.79□□□□□ -0.04
RABGGTA-220ENST00000560998 GOLGA8IPA6NC78 632 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 GOLGA8JA6NMD2 632 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 DKC1O60832 514 aaKnown RBP eCLIP14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 TCEA3O75764 348 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 PSAPP07602 524 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 GM2AP17900 193 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 ZNF568Q3ZCX4 644 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 LONP2Q86WA8 852 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 MGARPQ8TDB4 240 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 RFFLQ8WZ73 363 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 NR1H4Q96RI1 486 aaPredicted RBP14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 AGPAT1Q99943 283 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 NTPCRQ9BSD7 190 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 TMEM117Q9H0C3 514 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 SUDS3Q9H7L9 328 aaPredicted RBP14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 JPH1Q9HDC5 661 aaPredicted RBP14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 KMT5AQ9NQR1 393 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 NKIRAS1Q9NYS0 192 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 TELO2Q9Y4R8 837 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 AFG3L2Q9Y4W6 797 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 PPP2R3BQ9Y5P8 575 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 ADGRA3Q8IWK6 1321 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 DENND3A2RUS2 1198 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 SPATA31C2B4DYI2 1134 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 TJP3O95049 919 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 SLCO1A2P46721 670 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 MXI1P50539 228 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 CACNA2D1P54289 1103 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 SFSWAPQ12872 951 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 RCN2Q14257 317 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 FOXB2Q5VYV0 432 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 SWSAP1Q6NVH7 229 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 CBWD2Q8IUF1 395 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 ART4Q93070 314 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 CDHR1Q96JP9 859 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 LRRC37BQ96QE4 947 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 TBC1D10AQ9BXI6 508 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 MAF1Q9H063 256 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 C17orf75Q9HAS0 396 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 PDLIM7Q9NR12 457 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 TAS2R14Q9NYV8 317 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 LNPEPQ9UIQ6 1025 aa14.78□□□□□ -0.04
RABGGTA-220ENST00000560998 PFASO15067 1338 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 MYPNQ86TC9 1320 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 IGSF9BQ9UPX0 1349 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 SPDYE16A6NNV3 312 aaPredicted RBP14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 MAGEB2O15479 319 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 STAM2O75886 525 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 FGFR4P22455 802 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 MARK3P27448 753 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 RPL21P46778 160 aaKnown RBP14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 SOX10P56693 466 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 SNRNP35Q16560 246 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms