RNA–Protein interactions for RNA: ENST00000560660.1

IVD-212, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 2

Gene IVD, Length 638 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-212ENST00000560660 VNN2O95498 520 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 PRAMEF12O95522 483 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 APBB3O95704 486 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 OR4Q2P0C623 313 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 GCFC2P16383 781 aaKnown RBP12.94□□□□□ -0.34
IVD-212ENST00000560660 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 MARCKSP29966 332 aaPredicted RBP12.94□□□□□ -0.34
IVD-212ENST00000560660 MAPK8P45983 427 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 GALK1P51570 392 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 OSTNP61366 133 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 DUSP4Q13115 394 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 DCAF4L1Q3SXM0 396 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 PMS2CLQ68D20 193 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 GAREM2Q75VX8 874 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 CYP2U1Q7Z449 544 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 RPLP0P6Q8NHW5 317 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 BSNDQ8WZ55 320 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 PIGKQ92643 395 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 DDX12PQ92771 950 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 CHFRQ96EP1 664 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 SMG9Q9H0W8 520 aaKnown RBP12.94□□□□□ -0.34
IVD-212ENST00000560660 CRISPLD1Q9H336 500 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 EBF3Q9H4W6 596 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 KCNJ14Q9UNX9 436 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 SLC27A5Q9Y2P5 690 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 ASH1LQ9NR48 2969 aaKnown RBP12.94□□□□□ -0.34
IVD-212ENST00000560660 TRIP11Q15643 1979 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 NUP205Q92621 2012 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 CELSR3Q9NYQ7 3312 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 FAM221BA6H8Z2 402 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.34
IVD-212ENST00000560660 GABRR2P28476 465 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 PDIA3P30101 505 aaKnown RBP12.93□□□□□ -0.34
IVD-212ENST00000560660 MCM4P33991 863 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
IVD-212ENST00000560660 ALDH1A3P47895 512 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 DHPSP49366 369 aaPredicted RBP12.93□□□□□ -0.34
IVD-212ENST00000560660 MCM2P49736 904 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 YARSP54577 528 aaKnown RBP12.93□□□□□ -0.34
IVD-212ENST00000560660 SCAPQ12770 1279 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 PLD1Q13393 1074 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 RUNX3Q13761 415 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 DMC1Q14565 340 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 USP39Q53GS9 565 aaKnown RBP12.93□□□□□ -0.34
IVD-212ENST00000560660 ARHGAP15Q53QZ3 475 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 NT5DC1Q5TFE4 455 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 TRIM68Q6AZZ1 485 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 GALNT17Q6IS24 598 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 ALKAL1Q6UXT8 129 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 SYT13Q7L8C5 426 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 DNAJB7Q7Z6W7 309 aaPredicted RBP12.93□□□□□ -0.34
IVD-212ENST00000560660 SLFN12Q8IYM2 578 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 CEP120Q8N960 986 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 APPL2Q8NEU8 664 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 SPDYE1Q8NFV5 336 aaPredicted RBP12.93□□□□□ -0.34
IVD-212ENST00000560660 HNRNPLLQ8WVV9 542 aaKnown RBP12.93□□□□□ -0.34
IVD-212ENST00000560660 SUSD3Q96L08 255 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 ZMAT2Q96NC0 199 aaKnown RBP12.93□□□□□ -0.34
IVD-212ENST00000560660 TPSD1Q9BZJ3 242 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 CCDC113Q9H0I3 377 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 SLC38A7Q9NVC3 462 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 PCDHA12Q9UN75 941 aa12.93□□□□□ -0.34
IVD-212ENST00000560660 ASCC3Q8N3C0 2202 aaKnown RBP12.93□□□□□ -0.34
IVD-212ENST00000560660 H0Y626 953 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 TRIM16O95361 564 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 DEXIO95424 95 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 DRD1P21728 446 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 BCKDHBP21953 392 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 RPL9P32969 192 aaKnown RBP12.92□□□□□ -0.34
IVD-212ENST00000560660 CYP4F8P98187 520 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 LMAN2Q12907 356 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 PSMD2Q13200 908 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 TRIM61Q5EBN2 209 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 ATF7IP2Q5U623 682 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 NAIF1Q69YI7 327 aaPredicted RBP12.92□□□□□ -0.34
IVD-212ENST00000560660 PIK3AP1Q6ZUJ8 805 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 MCPH1Q8NEM0 835 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 BEST2Q8NFU1 509 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 DEPTORQ8TB45 409 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 C18orf25Q96B23 403 aaPredicted RBP12.92□□□□□ -0.34
IVD-212ENST00000560660 JAKMIP1Q96N16 626 aaKnown RBP12.92□□□□□ -0.34
IVD-212ENST00000560660 TBC1D32Q96NH3 1257 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 FAM83CQ9BQN1 747 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 TASP1Q9H6P5 420 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 POLD4Q9HCU8 107 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 HPS4Q9NQG7 708 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 TIMM13Q9Y5L4 95 aaPredicted RBP12.92□□□□□ -0.34
IVD-212ENST00000560660 PCNX2A6NKB5 2137 aa12.92□□□□□ -0.34
IVD-212ENST00000560660 THADAQ6YHU6 1953 aa12.91□□□□□ -0.34
IVD-212ENST00000560660 HELZ2Q9BYK8 2649 aaKnown RBP12.91□□□□□ -0.34
IVD-212ENST00000560660 SOAT2O75908 522 aa12.91□□□□□ -0.34
IVD-212ENST00000560660 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.34
IVD-212ENST00000560660 FAM193AP78312 1265 aa12.91□□□□□ -0.34
IVD-212ENST00000560660 AMPD2Q01433 879 aa12.91□□□□□ -0.34
IVD-212ENST00000560660 XKR4Q5GH76 650 aa12.91□□□□□ -0.34
IVD-212ENST00000560660 BLOC1S2Q6QNY1 142 aa12.91□□□□□ -0.34
IVD-212ENST00000560660 C11orf74Q86VG3 221 aa12.91□□□□□ -0.34
IVD-212ENST00000560660 LRIG1Q96JA1 1093 aa12.91□□□□□ -0.34
IVD-212ENST00000560660 NAP1L4Q99733 375 aaKnown RBP12.91□□□□□ -0.34
IVD-212ENST00000560660 P2RY13Q9BPV8 354 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms