RNA–Protein interactions for RNA: ENST00000560471.5

SHF-206, Transcript of Src homology 2 domain containing F, human

TSL 5 BASIC

Gene SHF, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHF-206	ENST00000560471	CCDC63	Q8NA47	563 aa		27.58	■■■□□ 2.01
SHF-206	ENST00000560471	ZNF606	Q8WXB4	792 aa		27.58	■■■□□ 2.01
SHF-206	ENST00000560471	JDP2	Q8WYK2	163 aa		27.58	■■■□□ 2.01
SHF-206	ENST00000560471	CAMKK2	Q96RR4	588 aa		27.58	■■■□□ 2.01
SHF-206	ENST00000560471	ACAD9	Q9H845	621 aa		27.58	■■■□□ 2.01
SHF-206	ENST00000560471	MAFB	Q9Y5Q3	323 aa	Predicted RBP	27.58	■■■□□ 2.01
SHF-206	ENST00000560471	LIAS	O43766	372 aa		27.58	■■■□□ 2.01
SHF-206	ENST00000560471	CDH16	O75309	829 aa		27.58	■■■□□ 2.01
SHF-206	ENST00000560471	TBXAS1	P24557	533 aa	Predicted RBP	27.58	■■■□□ 2.01
SHF-206	ENST00000560471	ZNF252P-AS1	Q0IIN9	211 aa		27.58	■■■□□ 2.01
SHF-206	ENST00000560471	PLCD3	Q8N3E9	789 aa		27.58	■■■□□ 2.01
SHF-206	ENST00000560471	DOCK1	Q14185	1865 aa		27.58	■■■□□ 2
SHF-206	ENST00000560471	ADGRA2	Q96PE1	1338 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	TTLL13P	A6NNM8	815 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	ATF7	P17544	494 aa	Predicted RBP	27.57	■■■□□ 2
SHF-206	ENST00000560471	MAGEA4	P43358	317 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	MFSD7	Q6UXD7	560 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	WRNIP1	Q96S55	665 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	IP6K2	Q9UHH9	426 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	ETS1	P14921	441 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	MMP8	P22894	467 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	RELL1	Q8IUW5	271 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	ZCCHC9	Q8N567	271 aa	Known RBP	27.57	■■■□□ 2
SHF-206	ENST00000560471	ACSF2	Q96CM8	615 aa	Predicted RBP	27.57	■■■□□ 2
SHF-206	ENST00000560471	SLITRK1	Q96PX8	696 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	TEX13B	Q9BXU2	312 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	EURL	Q9NYK6	297 aa		27.57	■■■□□ 2
SHF-206	ENST00000560471	CST3	P01034	146 aa	Predicted RBP	27.56	■■■□□ 2
SHF-206	ENST00000560471	KRT1	P04264	644 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	STX2	P32856	288 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	RDX	P35241	583 aa	Known RBP	27.56	■■■□□ 2
SHF-206	ENST00000560471	TBC1D1	Q86TI0	1168 aa	Predicted RBP	27.56	■■■□□ 2
SHF-206	ENST00000560471	MICALL2	Q8IY33	904 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	TGS1	Q96RS0	853 aa	Known RBP	27.56	■■■□□ 2
SHF-206	ENST00000560471	AS3MT	Q9HBK9	375 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	KCNG1	Q9UIX4	513 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	IVNS1ABP	Q9Y6Y0	642 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	TMEM191C	A6NGB0	347 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	LDHA	P00338	332 aa	Known RBP	27.56	■■■□□ 2
SHF-206	ENST00000560471	TMEM191B	P0C7N4	346 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	TNFSF9	P41273	254 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	STAT4	Q14765	748 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	TMED2	Q15363	201 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	SLC7A3	Q8WY07	619 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	SAYSD1	Q9NPB0	183 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	PICK1	Q9NRD5	415 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471	ZNF148	Q9UQR1	794 aa		27.56	■■■□□ 2
SHF-206	ENST00000560471		F8VP50	259 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	SUN1	O94901	812 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	ZNF132	P52740	706 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	27.55	■■■□□ 2
SHF-206	ENST00000560471	TXNRD3NB	Q6F5E7	133 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	SPATA21	Q7Z572	469 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	CCDC91	Q7Z6B0	441 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	MCEE	Q96PE7	176 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	CCDC77	Q9BR77	488 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	27.55	■■■□□ 2
SHF-206	ENST00000560471	OGDH	Q02218	1023 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	RCOR2	Q8IZ40	523 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	TCP11	Q8WWU5	503 aa		27.55	■■■□□ 2
SHF-206	ENST00000560471	SI	P14410	1827 aa		27.54	■■■□□ 2
SHF-206	ENST00000560471	STAM2	O75886	525 aa		27.54	■■■□□ 2
SHF-206	ENST00000560471	TGFB2	P61812	414 aa		27.54	■■■□□ 2
SHF-206	ENST00000560471	ZNF394	Q53GI3	561 aa		27.54	■■■□□ 2
SHF-206	ENST00000560471	CGB2	Q6NT52	195 aa		27.54	■■■□□ 2
SHF-206	ENST00000560471	CEP57	Q86XR8	500 aa		27.54	■■■□□ 2
SHF-206	ENST00000560471	UBR7	Q8N806	425 aa		27.54	■■■□□ 2
SHF-206	ENST00000560471	HAUS1	Q96CS2	278 aa		27.54	■■■□□ 2
SHF-206	ENST00000560471	DNALI1	O14645	258 aa	Predicted RBP	27.53	■■■□□ 2
SHF-206	ENST00000560471	ATG7	O95352	703 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	BRD2	P25440	801 aa	Known RBP	27.53	■■■□□ 2
SHF-206	ENST00000560471	CAPS	Q13938	189 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	FASTKD3	Q14CZ7	662 aa	Known RBP	27.53	■■■□□ 2
SHF-206	ENST00000560471	RBM41	Q96IZ5	413 aa	Known RBP	27.53	■■■□□ 2
SHF-206	ENST00000560471	NKIRAS1	Q9NYS0	192 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	RASA4B	C9J798	803 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	RASA4	O43374	803 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	GCA	P28676	217 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	CETN2	P41208	172 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	ARSE	P51690	589 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	NCALD	P61601	193 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	CNTN2	Q02246	1040 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	ARHGEF18	Q6ZSZ5	1173 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	MAML1	Q92585	1016 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	KCNN1	Q92952	543 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	LCT	P09848	1927 aa		27.53	■■■□□ 2
SHF-206	ENST00000560471	ATP6V1G2	O95670	118 aa		27.52	■■■□□ 2
SHF-206	ENST00000560471	IBSP	P21815	317 aa	Predicted RBP	27.52	■■■□□ 2
SHF-206	ENST00000560471	GMPS	P49915	693 aa	Predicted RBP	27.52	■■■□□ 2
SHF-206	ENST00000560471	GALNTL6	Q49A17	601 aa		27.52	■■■□□ 2
SHF-206	ENST00000560471	DCAF15	Q66K64	600 aa		27.52	■■■□□ 2
SHF-206	ENST00000560471	SPOCD1	Q6ZMY3	1216 aa		27.52	■■■□□ 2
SHF-206	ENST00000560471	ZBTB33	Q86T24	672 aa		27.52	■■■□□ 2
SHF-206	ENST00000560471	TCRBV5S1A1T	A0A578	114 aa		27.52	■■■□□ 2
SHF-206	ENST00000560471	PECAM1	P16284	738 aa	Predicted RBP	27.52	■■■□□ 2
SHF-206	ENST00000560471	FOXN2	P32314	431 aa		27.52	■■■□□ 2
SHF-206	ENST00000560471	LMNB2	Q03252	620 aa		27.52	■■■□□ 2
SHF-206	ENST00000560471	PREPL	Q4J6C6	727 aa	Predicted RBP	27.52	■■■□□ 2
SHF-206	ENST00000560471	EAPP	Q56P03	285 aa	Predicted RBP	27.52	■■■□□ 2
SHF-206	ENST00000560471	C12orf42	Q96LP6	360 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms