RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 OLIG1Q8TAK6 271 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 URGCPQ8TCY9 931 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 CLP1Q92989 425 aaKnown RBP10.07□□□□□ -0.8
HERC1-206ENST00000559996 DDX27Q96GQ7 796 aaKnown RBP10.07□□□□□ -0.8
HERC1-206ENST00000559996 UROC1Q96N76 676 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 PPP1R9BQ96SB3 815 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 SLC9A7Q96T83 725 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 RAD9AQ99638 391 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 VN1R3Q9BXE9 311 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 EDEM3Q9BZQ6 932 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 UBE2TQ9NPD8 197 aaPredicted RBP10.07□□□□□ -0.8
HERC1-206ENST00000559996 APEX2Q9UBZ4 518 aa10.07□□□□□ -0.8
HERC1-206ENST00000559996 GABRDO14764 452 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 ALDH2P05091 517 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 PNMA6AP0CW24 399 aaPredicted RBP10.06□□□□□ -0.8
HERC1-206ENST00000559996 MYOGP15173 224 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 CLCN1P35523 988 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 TAF6P49848 677 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 BCAR1P56945 870 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 CETN1Q12798 172 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 DRAP1Q14919 205 aaPredicted RBP10.06□□□□□ -0.8
HERC1-206ENST00000559996 ZNF699Q32M78 642 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 WDR59Q6PJI9 974 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 IRF2BP2Q7Z5L9 587 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 ABI1Q8IZP0 508 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 LRRC43Q8N309 656 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 CPLX3Q8WVH0 158 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 KBTBD7Q8WVZ9 684 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 SHC3Q92529 594 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 SENP8Q96LD8 212 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 NT5C1BQ96P26 610 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 TMEM175Q9BSA9 504 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 NUP58Q9BVL2 599 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 MRPL9Q9BYD2 267 aaKnown RBP10.06□□□□□ -0.8
HERC1-206ENST00000559996 STK33Q9BYT3 514 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 GPR62Q9BZJ7 368 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 NLRC4Q9NPP4 1024 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 CEP72Q9P209 647 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 L1RE1Q9UN81 338 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 INSL6Q9Y581 213 aa10.06□□□□□ -0.8
HERC1-206ENST00000559996 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.06□□□□□ -0.8
HERC1-206ENST00000559996 KIAA1671Q9BY89 1806 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 I3L4J1 428 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 HCRTO43612 131 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 TACC1O75410 805 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 B3GAT3O94766 335 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 CYP11A1P05108 521 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 TPM3P06753 285 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 WEE2P0C1S8 567 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 FAM163BP0C2L3 166 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 FECHP22830 423 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 LMO2P25791 158 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 HNRNPH3P31942 346 aaKnown RBP10.05□□□□□ -0.8
HERC1-206ENST00000559996 PNPLA4P41247 253 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 RAP1GAPP47736 663 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 OR1G1P47890 313 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 ADKP55263 362 aaKnown RBP10.05□□□□□ -0.8
HERC1-206ENST00000559996 RNASELQ05823 741 aaKnown RBP10.05□□□□□ -0.8
HERC1-206ENST00000559996 CUL2Q13617 745 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 MRPL58Q14197 206 aaKnown RBP10.05□□□□□ -0.8
HERC1-206ENST00000559996 BTG3Q14201 252 aaPredicted RBP10.05□□□□□ -0.8
HERC1-206ENST00000559996 ZNF667Q5HYK9 610 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 WDR44Q5JSH3 913 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 KIAA0319Q5VV43 1072 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 HGSNATQ68CP4 663 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 PDXDC1Q6P996 788 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 KCNT2Q6UVM3 1135 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 DPH6Q7L8W6 267 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 OSTM1Q86WC4 334 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 TMEM139Q8IV31 216 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 FAM71AQ8IYT1 594 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 SLC39A11Q8N1S5 342 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 PPM1KQ8N3J5 372 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 COLGALT1Q8NBJ5 622 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 SPC24Q8NBT2 197 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 NEK11Q8NG66 645 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 HASPINQ8TF76 798 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 SUSD3Q96L08 255 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 TWNKQ96RR1 684 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 DNAJC7Q99615 494 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 RTP3Q9BQQ7 232 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 MRPL45Q9BRJ2 306 aaKnown RBP10.05□□□□□ -0.8
HERC1-206ENST00000559996 UBE2OQ9C0C9 1292 aaKnown RBP10.05□□□□□ -0.8
HERC1-206ENST00000559996 NIF3L1Q9GZT8 377 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 SMYD3Q9H7B4 428 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 ACP6Q9NPH0 428 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 AIPL1Q9NZN9 384 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 IMPACTQ9P2X3 320 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 NXF1Q9UBU9 619 aaKnown RBP10.05□□□□□ -0.8
HERC1-206ENST00000559996 FAN1Q9Y2M0 1017 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 YBX2Q9Y2T7 364 aaKnown RBP10.05□□□□□ -0.8
HERC1-206ENST00000559996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.05□□□□□ -0.8
HERC1-206ENST00000559996 SNX9Q9Y5X1 595 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 VWA8A3KMH1 1905 aa10.05□□□□□ -0.8
HERC1-206ENST00000559996 LAMA2P24043 3122 aaKnown RBP10.05□□□□□ -0.8
HERC1-206ENST00000559996 LINC01553A4QN01 128 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 LRRC53A6NM62 1247 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 CYB561D2O14569 222 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 TBC1D4O60343 1298 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 CILPO75339 1184 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms