RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 WSCD1Q658N2 575 aa21.82■■□□□ 1.08
TSPAN3-207ENST00000559494 FRMD5Q7Z6J6 570 aa21.82■■□□□ 1.08
TSPAN3-207ENST00000559494 XYLT2Q9H1B5 865 aa21.82■■□□□ 1.08
TSPAN3-207ENST00000559494 ARMCX3Q9UH62 379 aaPredicted RBP21.82■■□□□ 1.08
TSPAN3-207ENST00000559494 FBXL5Q9UKA1 691 aa21.82■■□□□ 1.08
TSPAN3-207ENST00000559494 CDY1Q9Y6F8 540 aa21.82■■□□□ 1.08
TSPAN3-207ENST00000559494 XIRP2A4UGR9 3374 aa21.82■■□□□ 1.08
TSPAN3-207ENST00000559494 H3BQ06 376 aaPredicted RBP21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 TGM5O43548 720 aa21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 MYO1EQ12965 1108 aa21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 TRPC3Q13507 836 aa21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 NCOA4Q13772 614 aa21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 RAB33AQ14088 237 aa21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 OVOS1Q6IE37 1185 aa21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 CASP10Q92851 521 aa21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 DACH1Q9UI36 760 aa21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 SNX9Q9Y5X1 595 aa21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 PLXNA3P51805 1871 aa21.81■■□□□ 1.08
TSPAN3-207ENST00000559494 ARHGEF37A1IGU5 675 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 SPATA31D3P0C874 917 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 PTMSP20962 102 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 ERCC5P28715 1186 aaPredicted RBP21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 GTF2H1P32780 548 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 SLC8B1Q6J4K2 584 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 ANKRD54Q6NXT1 300 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 SASS6Q6UVJ0 657 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 SPATA31D4Q6ZUB0 917 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 LIMS2Q7Z4I7 341 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 ELMO3Q96BJ8 720 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 MSLNLQ96KJ4 702 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 MMRN2Q9H8L6 949 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 METTL14Q9HCE5 456 aaKnown RBP21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 THEGQ9P2T0 379 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 L1RE1Q9UN81 338 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 MTCL1Q9Y4B5 1905 aaKnown RBP21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 STAU1O95793 577 aaKnown RBP21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 GLUD1P00367 558 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 C1RP00736 705 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 HLA-DRAP01903 254 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 ATICP31939 592 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 SOWAHAQ2M3V2 549 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 CCDC40Q4G0X9 1142 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 CT47A1Q5JQC4 288 aaPredicted RBP21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 ZNF280DQ6N043 979 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 SYCE2Q6PIF2 218 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 METTL23Q86XA0 190 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 PDCL2Q8N4E4 241 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 SYAP1Q96A49 352 aaPredicted RBP21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 RTP3Q9BQQ7 232 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 TMEM8AQ9HCN3 771 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 DSEQ9UL01 958 aa21.8■■□□□ 1.08
TSPAN3-207ENST00000559494 HUS1O60921 280 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 FGFR1OPO95684 399 aaKnown RBP21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 MARSP56192 900 aaKnown RBP21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 ARPP19P56211 112 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 ROR1Q01973 937 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 CLUL1Q15846 466 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 LEXMQ3ZCV2 418 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 DCAF17Q5H9S7 520 aaPredicted RBP21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 TCERG1LQ5VWI1 586 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 IRF2BP1Q8IU81 584 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 TOP6BLQ8N6T0 577 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 TAS1R2Q8TE23 839 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 SLC35C1Q96A29 364 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 VRTNQ9H8Y1 702 aa21.79■■□□□ 1.08
TSPAN3-207ENST00000559494 WDR27A2RRH5 827 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 LRRN2O75325 713 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 ABLIM3O94929 683 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 GNA14O95837 355 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 SGSM1Q2NKQ1 1148 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 WDR72Q3MJ13 1102 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 KRT39Q6A163 491 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 DPH6Q7L8W6 267 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 OSTM1Q86WC4 334 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 C12orf76Q8N812 135 aaPredicted RBP21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 KREMEN2Q8NCW0 462 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 SEMA4DQ92854 862 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 TMEM209Q96SK2 561 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 OXCT2Q9BYC2 517 aaPredicted RBP21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 S1PR5Q9H228 398 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 ANO10Q9NW15 660 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 POLIQ9UNA4 740 aa21.78■■□□□ 1.08
TSPAN3-207ENST00000559494 UNC80Q8N2C7 3258 aa21.77■■□□□ 1.08
TSPAN3-207ENST00000559494 OR6C75A6NL08 312 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 STX10O60499 249 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 OR4Q2P0C623 313 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 SRGAP2BP0DMP2 458 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 HOXB8P17481 243 aaPredicted RBP21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 ZNF699Q32M78 642 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 CBWD6Q4V339 395 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 CBWD3Q5JTY5 395 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 CBWD5Q5RIA9 395 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 C11orf57Q6ZUT1 292 aaPredicted RBP21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 TRIM59Q8IWR1 403 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 TMEM86AQ8N2M4 240 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 OR10T2Q8NGX3 314 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 ZNF461Q8TAF7 563 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 FEZF2Q8TBJ5 459 aa21.77■■□□□ 1.07
TSPAN3-207ENST00000559494 HDAC7Q8WUI4 952 aa21.77■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms