RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 SIT1Q9Y3P8 196 aa19.2■□□□□ 0.66
TPM1-218ENST00000559281 CACNA1HO95180 2353 aa19.2■□□□□ 0.66
TPM1-218ENST00000559281 CYB561D2O14569 222 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 KIAA0391O15091 583 aaKnown RBP19.19■□□□□ 0.66
TPM1-218ENST00000559281 SPTLC1O15269 473 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 OR4Q2P0C623 313 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 CEBPBP17676 345 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 PNPLA4P41247 253 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 STARD6P59095 220 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 PRKCQQ04759 706 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 DUSP4Q13115 394 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 SLC44A4Q53GD3 710 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 FOXD4L5Q5VV16 416 aaPredicted RBP19.19■□□□□ 0.66
TPM1-218ENST00000559281 FOXD4L4Q8WXT5 416 aaPredicted RBP19.19■□□□□ 0.66
TPM1-218ENST00000559281 ELSPBP1Q96BH3 223 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 KXD1Q9BQD3 176 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 PYM1Q9BRP8 204 aaKnown RBP19.19■□□□□ 0.66
TPM1-218ENST00000559281 GPR88Q9GZN0 384 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 ZFP14Q9HCL3 533 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 FAM86C1Q9NVL1 165 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 KBTBD4Q9NVX7 518 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 HSFX1Q9UBD0 423 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 CFAP45Q9UL16 551 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 YIPF1Q9Y548 306 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 ASB3Q9Y575 518 aa19.19■□□□□ 0.66
TPM1-218ENST00000559281 EXTL3O43909 919 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 MYL4P12829 197 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 TUFMP49411 452 aaKnown RBP19.18■□□□□ 0.66
TPM1-218ENST00000559281 CASP5P51878 434 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 EPHA5P54756 1037 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 TFAMQ00059 246 aaKnown RBP19.18■□□□□ 0.66
TPM1-218ENST00000559281 SMARCB1Q12824 385 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 SNW1Q13573 536 aaKnown RBP19.18■□□□□ 0.66
TPM1-218ENST00000559281 SV2CQ496J9 727 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 CENPPQ6IPU0 288 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 BRSK2Q8IWQ3 736 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 DHX58Q96C10 678 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 TCEAL4Q96EI5 215 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 SAAL1Q96ER3 474 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 ZNF560Q96MR9 790 aa19.18■□□□□ 0.66
TPM1-218ENST00000559281 RBAKQ9NYW8 714 aaPredicted RBP19.18■□□□□ 0.66
TPM1-218ENST00000559281 WDFY4Q6ZS81 3184 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 DOCK8Q8NF50 2099 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 KPNA7A9QM74 516 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 PRPF6O94906 941 aaKnown RBP19.17■□□□□ 0.66
TPM1-218ENST00000559281 F13A1P00488 732 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 MLF2Q15773 248 aaPredicted RBP19.17■□□□□ 0.66
TPM1-218ENST00000559281 E2F4Q16254 413 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 TANGO2Q6ICL3 276 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 ITIH5Q86UX2 942 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 EFCAB13Q8IY85 973 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 HS6ST3Q8IZP7 471 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 ATAD1Q8NBU5 361 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 TRIM9Q9C026 710 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 MAGEF1Q9HAY2 307 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 FAM13BQ9NYF5 915 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 SLC27A5Q9Y2P5 690 aa19.17■□□□□ 0.66
TPM1-218ENST00000559281 R3HCC1Q9Y3T6 440 aaKnown RBP19.17■□□□□ 0.66
TPM1-218ENST00000559281 MTMR11A4FU01 709 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 PROB1E7EW31 1015 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 FGF19O95750 216 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 CCR2P41597 374 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 ME1P48163 572 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 ASIC1P78348 528 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 ANGPT1Q15389 498 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 FOXD4L6Q3SYB3 417 aaPredicted RBP19.16■□□□□ 0.66
TPM1-218ENST00000559281 FAM78AQ5JUQ0 283 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 SHC4Q6S5L8 630 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 FOXD4L3Q6VB84 417 aaPredicted RBP19.16■□□□□ 0.66
TPM1-218ENST00000559281 GPD1LQ8N335 351 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 NOC3LQ8WTT2 800 aaKnown RBP19.16■□□□□ 0.66
TPM1-218ENST00000559281 C2orf15Q8WU43 125 aaKnown RBP19.16■□□□□ 0.66
TPM1-218ENST00000559281 SMARCD2Q92925 531 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 ASB16Q96NS5 453 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 NELL2Q99435 816 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 CBWD1Q9BRT8 395 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 ZCWPW1Q9H0M4 648 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 PCIF1Q9H4Z3 704 aa19.16■□□□□ 0.66
TPM1-218ENST00000559281 KANSL1LA0AUZ9 987 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 GOLGA8IPA6NC78 632 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 GOLGA8JA6NMD2 632 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 NBL1P41271 181 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 VEPH1Q14D04 833 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 SURF1Q15526 300 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 SLC39A12Q504Y0 691 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 WSCD1Q658N2 575 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 CNNM4Q6P4Q7 775 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 DCP1BQ8IZD4 617 aaKnown RBP19.15■□□□□ 0.66
TPM1-218ENST00000559281 CSGALNACT2Q8N6G5 542 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 PJA1Q8NG27 643 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 E2F7Q96AV8 911 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 C7orf25Q9BPX7 421 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 TRMT61BQ9BVS5 477 aaKnown RBP19.15■□□□□ 0.66
TPM1-218ENST00000559281 SLITRK6Q9H5Y7 841 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 KIAA1586Q9HCI6 787 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 AGAP1Q9UPQ3 857 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 KMT2EQ8IZD2 1858 aa19.15■□□□□ 0.66
TPM1-218ENST00000559281 ZNF233A6NK53 670 aa19.14■□□□□ 0.65
TPM1-218ENST00000559281 EIF3DO15371 548 aaKnown RBP eCLIP19.14■□□□□ 0.65
TPM1-218ENST00000559281 POLR2DO15514 142 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms