RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ZNF572Q7Z3I7 529 aaPredicted RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 PCGF5Q86SE9 256 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 MICU3Q86XE3 530 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 PLXDC1Q8IUK5 500 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 IGDCC3Q8IVU1 814 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 GALNT15Q8N3T1 639 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 LILRA3Q8N6C8 439 aaPredicted RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 DCBLD1Q8N8Z6 715 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 NAXEQ8NCW5 288 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 SLC17A8Q8NDX2 589 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 NLGN4YQ8NFZ3 816 aaPredicted RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 SMCR8Q8TEV9 937 aaPredicted RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 ZCCHC14Q8WYQ9 949 aaKnown RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 FAM168AQ92567 244 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 LPPQ93052 612 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 CEP95Q96GE4 821 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 PHACTR3Q96KR7 559 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 UBXN10Q96LJ8 280 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 PRPF18Q99633 342 aaKnown RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 CNPPD1Q9BV87 410 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 TMEM120AQ9BXJ8 343 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 MS4A7Q9GZW8 240 aaPredicted RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 SIK2Q9H0K1 926 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 SLC6A15Q9H2J7 730 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 C12orf65Q9H3J6 166 aaKnown RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 KCNK12Q9HB15 430 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 HEYLQ9NQ87 328 aaPredicted RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 VPS45Q9NRW7 570 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 NTMQ9P121 344 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 ZNF69Q9UC07 566 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 MBD1Q9UIS9 605 aaPredicted RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 MID2Q9UJV3 735 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 CRYL1Q9Y2S2 319 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 GPR52Q9Y2T5 361 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 NR2E1Q9Y466 385 aa2.69□□□□□ -1.98
GABPB1-209ENST00000559100 CTDP1Q9Y5B0 961 aaPredicted RBP2.69□□□□□ -1.98
GABPB1-209ENST00000559100 IRS2Q9Y4H2 1338 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 TEX51A0A1B0GUA7 166 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 MYOCOSA0A1B0GUC4 107 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 A0A1W2PRX2 142 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 CDHR4A6H8M9 788 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 SYT5O00445 386 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 WNT10BO00744 389 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 FCHO1O14526 889 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 NPC1O15118 1278 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 ARHGAP6O43182 974 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 MTSS1O43312 755 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 PEX10O60683 326 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 USP1O94782 785 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 KLHL18O94889 574 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 HAUS5O94927 633 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 TNFRSF6BO95407 300 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 POMCP01189 267 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 SNRPA1P09661 255 aaKnown RBP2.68□□□□□ -1.98
GABPB1-209ENST00000559100 SBK3P0C264 359 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 SRGNP10124 158 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 COL6A1P12109 1028 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 TPH1P17752 444 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 XBP1P17861 261 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 ITGB5P18084 799 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 CNTFP26441 200 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 IL1R2P27930 398 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 CASP2P42575 452 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 SLC11A2P49281 568 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 ARL4CP56559 192 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 HTRA4P83105 476 aaPredicted RBP2.68□□□□□ -1.98
GABPB1-209ENST00000559100 GALNT1Q10472 559 aaPredicted RBP2.68□□□□□ -1.98
GABPB1-209ENST00000559100 SLC29A2Q14542 456 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 KIF22Q14807 665 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 RAB30Q15771 203 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 MLANAQ16655 118 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 ADCK5Q3MIX3 580 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 ARHGAP15Q53QZ3 475 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 FAM47AQ5JRC9 791 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 MFSD14BQ5SR56 506 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 UTP14CQ5TAP6 766 aaKnown RBP2.68□□□□□ -1.98
GABPB1-209ENST00000559100 CACHD1Q5VU97 1274 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 MCTP2Q6DN12 878 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 SULT6B1Q6IMI4 303 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 JMJD6Q6NYC1 403 aaPredicted RBP2.68□□□□□ -1.98
GABPB1-209ENST00000559100 CNKSR3Q6P9H4 555 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 KLHL17Q6TDP4 642 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 CYP26C1Q6V0L0 522 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 CATSPERGQ6ZRH7 1159 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 ZNF365Q70YC5 407 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 RALYLQ86SE5 291 aaKnown RBP2.68□□□□□ -1.98
GABPB1-209ENST00000559100 GATAD2AQ86YP4 633 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 C2CD5Q86YS7 1000 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 CCDC117Q8IWD4 279 aaPredicted RBP2.68□□□□□ -1.98
GABPB1-209ENST00000559100 REXO1L1PQ8IX06 675 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 CMTM4Q8IZR5 234 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 LINC00482Q8N8I6 264 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 IL17RDQ8NFM7 739 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 OR56A3Q8NH54 315 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 MAML1Q92585 1016 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 DDX17Q92841 729 aaKnown RBP2.68□□□□□ -1.98
GABPB1-209ENST00000559100 KCNN1Q92952 543 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 USP13Q92995 863 aaPredicted RBP2.68□□□□□ -1.98
GABPB1-209ENST00000559100 SPSB4Q96A44 273 aa2.68□□□□□ -1.98
GABPB1-209ENST00000559100 SNX27Q96L92 541 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms