RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 DPP7Q9UHL4 492 aa13□□□□□ -0.33
TPM1-216ENST00000558910 FBXL5Q9UKA1 691 aa13□□□□□ -0.33
TPM1-216ENST00000558910 FBXW11Q9UKB1 542 aa13□□□□□ -0.33
TPM1-216ENST00000558910 VWA8A3KMH1 1905 aa13□□□□□ -0.33
TPM1-216ENST00000558910 CLUHO75153 1309 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 WDR27A2RRH5 827 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 H7C4K7 107 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 SPTLC1O15269 473 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 ZMYND10O75800 440 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 SCP2P22307 547 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 SYKP43405 635 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 ZBTB6Q15916 424 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 SPATA1Q5VX52 437 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 ZNF280DQ6N043 979 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 PDXDC1Q6P996 788 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 CBWD2Q8IUF1 395 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 APPL2Q8NEU8 664 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 RSAD2Q8WXG1 361 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 SUSD3Q96L08 255 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 SENP8Q96LD8 212 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 MYADMQ96S97 322 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 TMEM209Q96SK2 561 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 PYM1Q9BRP8 204 aaKnown RBP12.99□□□□□ -0.33
TPM1-216ENST00000558910 TMEM206Q9H813 350 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 ATP6V1DQ9Y5K8 247 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 STYXL1Q9Y6J8 313 aa12.99□□□□□ -0.33
TPM1-216ENST00000558910 SYN3O14994 580 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 EXTL3O43909 919 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 N4BP1O75113 896 aaKnown RBP12.98□□□□□ -0.33
TPM1-216ENST00000558910 SEC24AO95486 1093 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 ITGB3P05106 788 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 SLFN14P0C7P3 912 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 CYP3A5P20815 502 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 CMA1P23946 247 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 LRPAP1P30533 357 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 POLR2BP30876 1174 aaKnown RBP12.98□□□□□ -0.33
TPM1-216ENST00000558910 HOXD13P35453 343 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 ZXDAP98168 799 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 YWHAHQ04917 246 aaPredicted RBP12.98□□□□□ -0.33
TPM1-216ENST00000558910 ADCY1Q08828 1119 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 BFSP1Q12934 665 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 ALCAMQ13740 583 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 RAB33AQ14088 237 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 RNF19BQ6ZMZ0 732 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 OTOP3Q7RTS5 596 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 CD302Q8IX05 232 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 GPD1LQ8N335 351 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 HSPBP1Q9NZL4 362 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 AGAP1Q9UPQ3 857 aa12.98□□□□□ -0.33
TPM1-216ENST00000558910 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 CYB561D2O14569 222 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 XYLBO75191 536 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 SOAT2O75908 522 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 IL18RAPO95256 599 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 LRG1P02750 347 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 TMEM191BP0C7N4 346 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 DLATP10515 647 aaKnown RBP12.97□□□□□ -0.33
TPM1-216ENST00000558910 ODC1P11926 461 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 GARTP22102 1010 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 FSHRP23945 695 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 LILRA4P59901 499 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 STK4Q13043 487 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 PTPN21Q16825 1174 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 OVOS1Q6IE37 1185 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 C15orf39Q6ZRI6 1047 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 BRSK2Q8IWQ3 736 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 CSGALNACT2Q8N6G5 542 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 SCFD1Q8WVM8 642 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 CCDC127Q96BQ5 260 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 CORO1BQ9BR76 489 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 MTMR12Q9C0I1 747 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 SCAND2PQ9GZW5 306 aaPredicted RBP12.97□□□□□ -0.33
TPM1-216ENST00000558910 ASB7Q9H672 318 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 MAGEF1Q9HAY2 307 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 WDR6Q9NNW5 1121 aaKnown RBP12.97□□□□□ -0.33
TPM1-216ENST00000558910 ZDHHC7Q9NXF8 308 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 MAPK8IP1Q9UQF2 711 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 SLC27A5Q9Y2P5 690 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 BACE2Q9Y5Z0 518 aa12.97□□□□□ -0.33
TPM1-216ENST00000558910 C2orf16Q68DN1 1984 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 TMEM221A6NGB7 291 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 M0R296 226 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 LDHAP00338 332 aaKnown RBP12.96□□□□□ -0.33
TPM1-216ENST00000558910 PDGFBP01127 241 aaPredicted RBP12.96□□□□□ -0.33
TPM1-216ENST00000558910 TAF6P49848 677 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 WSCD1Q658N2 575 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 TRIM67Q6ZTA4 783 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 HFE2Q6ZVN8 426 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 CMASQ8NFW8 434 aaPredicted RBP12.96□□□□□ -0.33
TPM1-216ENST00000558910 OR5B17Q8NGF7 314 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 ITFG1Q8TB96 612 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 ZNF507Q8TCN5 953 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 HDAC7Q8WUI4 952 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 EDAQ92838 391 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 ERCC4Q92889 916 aaPredicted RBP12.96□□□□□ -0.33
TPM1-216ENST00000558910 KCNN1Q92952 543 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 PBXIP1Q96AQ6 731 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 AGPAT3Q9NRZ7 376 aa12.96□□□□□ -0.33
TPM1-216ENST00000558910 DNMT3BQ9UBC3 853 aaKnown RBP12.96□□□□□ -0.33
TPM1-216ENST00000558910 R3HCC1Q9Y3T6 440 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms