RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 DUSP4Q13115 394 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 ALCAMQ13740 583 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 IQCEQ6IPM2 695 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 ARMCX5Q6P1M9 558 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 TTC9BQ8N6N2 239 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 IQUBQ8NA54 791 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 OR10T2Q8NGX3 314 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 KCNG4Q8TDN1 519 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 ZNF512Q96ME7 567 aaPredicted RBP12.89□□□□□ -0.35
HERC1-202ENST00000558324 OXCT2Q9BYC2 517 aaPredicted RBP12.89□□□□□ -0.35
HERC1-202ENST00000558324 TRIM9Q9C026 710 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 CRISPLD1Q9H336 500 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 CUEDC2Q9H467 287 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 CEP72Q9P209 647 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 SLC27A5Q9Y2P5 690 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 ZDBF2Q9HCK1 2354 aa12.89□□□□□ -0.35
HERC1-202ENST00000558324 TSC2P49815 1807 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 DOCK6Q96HP0 2047 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 MTMR11A4FU01 709 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 CYB561D2O14569 222 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 POLR2DO15514 142 aaKnown RBP12.88□□□□□ -0.35
HERC1-202ENST00000558324 SOAT2O75908 522 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 ITGB3P05106 788 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 GARTP22102 1010 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 CASP1P29466 404 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 POLR2BP30876 1174 aaKnown RBP12.88□□□□□ -0.35
HERC1-202ENST00000558324 CCR2P41597 374 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 AMPD3Q01432 767 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 DNM1Q05193 864 aaKnown RBP12.88□□□□□ -0.35
HERC1-202ENST00000558324 GPR17Q13304 367 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 PRSS36Q5K4E3 855 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 CYP4A22Q5TCH4 519 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 POTEHQ6S545 545 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 STXBP4Q6ZWJ1 553 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 METTL23Q86XA0 190 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 BRSK2Q8IWQ3 736 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 ATAD1Q8NBU5 361 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 LRRC27Q9C0I9 530 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 BLZF1Q9H2G9 400 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 TMEM206Q9H813 350 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 ASAH2Q9NR71 780 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 SLC2A4RGQ9NR83 387 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 COL4A3Q01955 1670 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 ANK1P16157 1881 aa12.88□□□□□ -0.35
HERC1-202ENST00000558324 ZNF197O14709 1029 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 EXTL3O43909 919 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 LDHAP00338 332 aaKnown RBP12.87□□□□□ -0.35
HERC1-202ENST00000558324 KRT19P08727 400 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
HERC1-202ENST00000558324 NUBP1P53384 320 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 POU5F1Q01860 360 aaKnown RBP12.87□□□□□ -0.35
HERC1-202ENST00000558324 SNW1Q13573 536 aaKnown RBP12.87□□□□□ -0.35
HERC1-202ENST00000558324 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 GRM2Q14416 872 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 SV2CQ496J9 727 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 SLC39A12Q504Y0 691 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 FAM26FQ5R3K3 315 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 WSCD1Q658N2 575 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 LMBRD2Q68DH5 695 aaPredicted RBP12.87□□□□□ -0.35
HERC1-202ENST00000558324 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 CHAMP1Q96JM3 812 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 ZNF560Q96MR9 790 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 SEPT5Q99719 369 aaPredicted RBP12.87□□□□□ -0.35
HERC1-202ENST00000558324 RTP3Q9BQQ7 232 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 PLA2G2FQ9BZM2 168 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 FOXQ1Q9C009 403 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 AVENQ9NQS1 362 aaPredicted RBP12.87□□□□□ -0.35
HERC1-202ENST00000558324 FAM13BQ9NYF5 915 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 GDE1Q9NZC3 331 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 DSEQ9UL01 958 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 MAFFQ9ULX9 164 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 AGAP1Q9UPQ3 857 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 NOTCH4Q99466 2003 aa12.87□□□□□ -0.35
HERC1-202ENST00000558324 KPNA7A9QM74 516 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 CYP11A1P05108 521 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 DCNP07585 359 aaKnown RBP12.86□□□□□ -0.35
HERC1-202ENST00000558324 PAX3P23760 479 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 AFMP43652 599 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 ALDH1A3P47895 512 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 EPHB3P54753 998 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 BFSP1Q12934 665 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 PLD1Q13393 1074 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 TEAD2Q15562 447 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 MGAT5BQ3V5L5 792 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 FAM78AQ5JUQ0 283 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 RESP18Q5W5W9 173 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 SCARA3Q6AZY7 606 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 TANGO2Q6ICL3 276 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 CENPPQ6IPU0 288 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 NT5DC4Q86YG4 428 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 CBWD2Q8IUF1 395 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 NELFCDQ8IXH7 590 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 CCDC105Q8IYK2 499 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 GRAMD1CQ8IYS0 662 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 THEM5Q8N1Q8 247 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 C1orf127Q8N9H9 656 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 DTWD2Q8NBA8 298 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms