RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 TFIP11Q9UBB9 837 aaKnown RBP10.97□□□□□ -0.65
USP3-207ENST00000558218 HSFX1Q9UBD0 423 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 AFF4Q9UHB7 1163 aaKnown RBP10.97□□□□□ -0.65
USP3-207ENST00000558218 FBXL5Q9UKA1 691 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 CDH7Q9ULB5 785 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 DOCK8Q8NF50 2099 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 ANO9A1A5B4 782 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 OR6C75A6NL08 312 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 ANKRD63C9JTQ0 380 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 PIRO00625 290 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 ZNF197O14709 1029 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 IL18RAPO95256 599 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 LRG1P02750 347 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 SRFP11831 508 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 GARTP22102 1010 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 LILRA4P59901 499 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 YWHAHQ04917 246 aaPredicted RBP10.96□□□□□ -0.65
USP3-207ENST00000558218 MYBPC2Q14324 1141 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 MTSS1LQ765P7 747 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 GRASPQ7Z6J2 395 aaPredicted RBP10.96□□□□□ -0.65
USP3-207ENST00000558218 USP37Q86T82 979 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 LEMD2Q8NC56 503 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 POMGNT1Q8WZA1 660 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 PANK2Q9BZ23 570 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 GDE1Q9NZC3 331 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 DNMT3BQ9UBC3 853 aaKnown RBP10.96□□□□□ -0.65
USP3-207ENST00000558218 TUBGCP4Q9UGJ1 667 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 DSEQ9UL01 958 aa10.96□□□□□ -0.65
USP3-207ENST00000558218 MUC6Q6W4X9 2439 aa10.96□□□□□ -0.66
USP3-207ENST00000558218 ZDBF2Q9HCK1 2354 aa10.96□□□□□ -0.66
USP3-207ENST00000558218 WDR27A2RRH5 827 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 PRRG1O14668 218 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 CCL16O15467 120 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 GCNT3O95395 438 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 F13A1P00488 732 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 CYP11A1P05108 521 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 MYBP10242 640 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 IDEP14735 1019 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 ADSSP30520 456 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 ACOT2P49753 483 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 SNRPFP62306 86 aaKnown RBP10.95□□□□□ -0.66
USP3-207ENST00000558218 GPR17Q13304 367 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 TMEM132DQ14C87 1099 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 KMT5BQ4FZB7 885 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 PABPC1LQ4VXU2 614 aaKnown RBP10.95□□□□□ -0.66
USP3-207ENST00000558218 ZBTB41Q5SVQ8 909 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 C9orf57Q5W0N0 161 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 JADE1Q6IE81 842 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 CRELD2Q6UXH1 353 aaPredicted RBP10.95□□□□□ -0.66
USP3-207ENST00000558218 DSTYKQ6XUX3 929 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 SYCP3Q8IZU3 236 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 CACTINQ8WUQ7 758 aaKnown RBP10.95□□□□□ -0.66
USP3-207ENST00000558218 FGF13Q92913 245 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 SLC2A4RGQ9NR83 387 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 RCOR1Q9UKL0 485 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 POLIQ9UNA4 740 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 DOCK6Q96HP0 2047 aa10.95□□□□□ -0.66
USP3-207ENST00000558218 A0A087X0B3 334 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 ODC1P11926 461 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 PNPLA4P41247 253 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 SPAG1Q07617 926 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 SMARCB1Q12824 385 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 PLD1Q13393 1074 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 HTR4Q13639 388 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 SURF1Q15526 300 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 CYP4A22Q5TCH4 519 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 IQCEQ6IPM2 695 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 SHC4Q6S5L8 630 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 GET4Q7L5D6 327 aaPredicted RBP10.94□□□□□ -0.66
USP3-207ENST00000558218 ELMOD1Q8N336 334 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 PDILTQ8N807 584 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 SENP8Q96LD8 212 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 ZNF512Q96ME7 567 aaPredicted RBP10.94□□□□□ -0.66
USP3-207ENST00000558218 C7orf25Q9BPX7 421 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 RTP3Q9BQQ7 232 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 TRIM9Q9C026 710 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 GPR88Q9GZN0 384 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 MFSD1Q9H3U5 465 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 CYP4F11Q9HBI6 524 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 KIAA1586Q9HCI6 787 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 DPP3Q9NY33 737 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 FAM13BQ9NYF5 915 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 MRPS23Q9Y3D9 190 aaKnown RBP10.94□□□□□ -0.66
USP3-207ENST00000558218 INSL5Q9Y5Q6 135 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 GTF3C3Q9Y5Q9 886 aa10.94□□□□□ -0.66
USP3-207ENST00000558218 NOTCH4Q99466 2003 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 PVALEFA0A1B0GWK0 134 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 EIF3DO15371 548 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP3-207ENST00000558218 EXTL3O43909 919 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 RHOP08100 348 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 NFICP08651 508 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 TAF6P49848 677 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 EPHA5P54756 1037 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 ARPP19P56211 112 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 NHLH1Q02575 133 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 ADCY1Q08828 1119 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 KCNA1Q09470 495 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 OVOS1Q6IE37 1185 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 PHLDB3Q6NSJ2 640 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 ARMCX5Q6P1M9 558 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms