RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 H7C4K7 107 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 FSCN2O14926 492 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 CLSTN1O94985 981 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 CXCL14O95715 111 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 IGFBP6P24592 240 aaPredicted RBP11.24□□□□□ -0.61
LRRC28-204ENST00000558172 DNAJB1P25685 340 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 FXR1P51114 621 aaKnown RBP eCLIP11.24□□□□□ -0.61
LRRC28-204ENST00000558172 COPB1P53618 953 aaKnown RBP11.24□□□□□ -0.61
LRRC28-204ENST00000558172 ERVFC1P60507 584 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 SMC1AQ14683 1233 aaKnown RBP11.24□□□□□ -0.61
LRRC28-204ENST00000558172 MIIPQ5JXC2 388 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 FKBP15Q5T1M5 1219 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 KIAA0319Q5VV43 1072 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 GBP6Q6ZN66 633 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 ANKS3Q6ZW76 656 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 TAS1R1Q7RTX1 841 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 CEP57Q86XR8 500 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 THEM5Q8N1Q8 247 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 GDPD5Q8WTR4 605 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 PIK3R5Q8WYR1 880 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 PPP2R3CQ969Q6 453 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 FAM81BQ96LP2 452 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 TCF25Q9BQ70 676 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 VPS16Q9H269 839 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 FAM124BQ9H5Z6 455 aaPredicted RBP11.24□□□□□ -0.61
LRRC28-204ENST00000558172 ENTPD7Q9NQZ7 604 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 SNX9Q9Y5X1 595 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 I3L4J1 428 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 RFXAPO00287 272 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 PES1O00541 588 aaKnown RBP11.23□□□□□ -0.61
LRRC28-204ENST00000558172 LILRB3O75022 631 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 TACC1O75410 805 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 OAZ2O95190 189 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 TKTP29401 623 aaKnown RBP11.23□□□□□ -0.61
LRRC28-204ENST00000558172 LHX1P48742 406 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 NOP14P78316 857 aaKnown RBP11.23□□□□□ -0.61
LRRC28-204ENST00000558172 YWHAHQ04917 246 aaPredicted RBP11.23□□□□□ -0.61
LRRC28-204ENST00000558172 CAMK1Q14012 370 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 MRPL58Q14197 206 aaKnown RBP11.23□□□□□ -0.61
LRRC28-204ENST00000558172 EXOC3L4Q17RC7 722 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 RTP2Q5QGT7 225 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 VARS2Q5ST30 1063 aaKnown RBP11.23□□□□□ -0.61
LRRC28-204ENST00000558172 SCARA3Q6AZY7 606 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 LIMS2Q7Z4I7 341 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 TTC39CQ8N584 583 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 MRPL43Q8N983 215 aaKnown RBP11.23□□□□□ -0.61
LRRC28-204ENST00000558172 LNX1Q8TBB1 728 aaPredicted RBP11.23□□□□□ -0.61
LRRC28-204ENST00000558172 RIN2Q8WYP3 895 aaPredicted RBP11.23□□□□□ -0.61
LRRC28-204ENST00000558172 SEMA4DQ92854 862 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 NT5C1BQ96P26 610 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 MMS19Q96T76 1030 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 EMILIN2Q9BXX0 1053 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 CYP3A43Q9HB55 503 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 RXFP1Q9HBX9 757 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 TAB2Q9NYJ8 693 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 FNIP2Q9P278 1114 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 NXF1Q9UBU9 619 aaKnown RBP11.23□□□□□ -0.61
LRRC28-204ENST00000558172 BACE2Q9Y5Z0 518 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 MYH10P35580 1976 aa11.23□□□□□ -0.61
LRRC28-204ENST00000558172 FSD2A1L4K1 749 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 C1RP00736 705 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 SERPINC1P01008 464 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 ATP1A3P13637 1013 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 TBXAS1P24557 533 aaPredicted RBP11.22□□□□□ -0.61
LRRC28-204ENST00000558172 CA8P35219 290 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 PTPN14Q15678 1187 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 PSMD5Q16401 504 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 SOWAHAQ2M3V2 549 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 PLPP4Q5VZY2 271 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 SMYD5Q6GMV2 418 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 OVOS1Q6IE37 1185 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 ZNF280DQ6N043 979 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 APTXQ7Z2E3 356 aaKnown RBP11.22□□□□□ -0.61
LRRC28-204ENST00000558172 DEFB123Q8N688 67 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 LMO3Q8TAP4 145 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 FAM161BQ96MY7 647 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 PI4K2AQ9BTU6 479 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 DNAI2Q9GZS0 605 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 NIF3L1Q9GZT8 377 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 NSUN3Q9H649 340 aaKnown RBP11.22□□□□□ -0.61
LRRC28-204ENST00000558172 GCNT4Q9P109 453 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 CHD7Q9P2D1 2997 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 MTRRQ9UBK8 725 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 L1RE1Q9UN81 338 aa11.22□□□□□ -0.61
LRRC28-204ENST00000558172 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.21□□□□□ -0.61
LRRC28-204ENST00000558172 C2orf71A6NGG8 1288 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 OR6C75A6NL08 312 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 LGALS16A8MUM7 142 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 C2CD2LO14523 706 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 GABRDO14764 452 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 TRIM21P19474 475 aaKnown RBP11.21□□□□□ -0.61
LRRC28-204ENST00000558172 WARSP23381 471 aaKnown RBP11.21□□□□□ -0.61
LRRC28-204ENST00000558172 IRS1P35568 1242 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 NDUFV1P49821 464 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 YWHAEP62258 255 aaKnown RBP11.21□□□□□ -0.61
LRRC28-204ENST00000558172 FANCCQ00597 558 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 CTXN3Q4LDR2 81 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 WSCD1Q658N2 575 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 SPOPLQ6IQ16 392 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 PPFIBP1Q86W92 1011 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms