RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TKTP29401 623 aaKnown RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 LTBRP36941 435 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 CLCN4P51793 760 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 ARPP19P56211 112 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 RBP5P82980 135 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 YWHAHQ04917 246 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 MYO1EQ12965 1108 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 TRPC3Q13507 836 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 PNOCQ13519 176 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 MYBPC2Q14324 1141 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 ZBTB6Q15916 424 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 SNRNP35Q16560 246 aaKnown RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 MSS51Q4VC12 460 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 RTP2Q5QGT7 225 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 RARS2Q5T160 578 aaKnown RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 C9orf57Q5W0N0 161 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 CRELD2Q6UXH1 353 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 CYP26C1Q6V0L0 522 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 CCDC149Q6ZUS6 474 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 C12orf56Q8IXR9 622 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 ELOA2Q8IYF1 753 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 RNF168Q8IYW5 571 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 THEM5Q8N1Q8 247 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 GUF1Q8N442 669 aaKnown RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 KREMEN2Q8NCW0 462 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 GLIS3Q8NEA6 775 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 LNX1Q8TBB1 728 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 SUSD3Q96L08 255 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 B3GALT6Q96L58 329 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 APOL5Q9BWW9 433 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 IKZF4Q9H2S9 585 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 MAN1C1Q9NR34 630 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 CLEC1BQ9P126 229 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 PRKAG3Q9UGI9 489 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 ITGA11Q9UKX5 1188 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 BACE2Q9Y5Z0 518 aa8.99□□□□□ -0.97
PSEN1-223ENST00000557511 TDRD15B5MCY1 1934 aaKnown RBP8.99□□□□□ -0.97
PSEN1-223ENST00000557511 DLL1O00548 723 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 PSMA7O14818 248 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 TGFB1I1O43294 461 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 HUS1O60921 280 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 XYLBO75191 536 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 GLP2RO95838 553 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 BMP1P13497 986 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 CPB1P15086 417 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 IL9P15248 144 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 RPL17P18621 184 aaKnown RBP8.98□□□□□ -0.97
PSEN1-223ENST00000557511 TYMPP19971 482 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 OR1D2P34982 312 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 GUCY2FP51841 1108 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 AP3M2P53677 418 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 DLX2Q07687 328 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-223ENST00000557511 SNW1Q13573 536 aaKnown RBP8.98□□□□□ -0.97
PSEN1-223ENST00000557511 PSMD6Q15008 389 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 SMAD2Q15796 467 aaKnown RBP8.98□□□□□ -0.97
PSEN1-223ENST00000557511 ZNF658Q5TYW1 1059 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-223ENST00000557511 CEP135Q66GS9 1140 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 CBWD2Q8IUF1 395 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 WDR49Q8IV35 697 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 CSGALNACT2Q8N6G5 542 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 SMRP1Q8NCR6 262 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 KIAA0895Q8NCT3 520 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 C3orf58Q8NDZ4 430 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 ENGASEQ8NFI3 743 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 SLC22A17Q8WUG5 538 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 CCDC127Q96BQ5 260 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 MSLNLQ96KJ4 702 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 ADAM7Q9H2U9 754 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 PDE11AQ9HCR9 933 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 ZDHHC7Q9NXF8 308 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 MTRRQ9UBK8 725 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 AGAP1Q9UPQ3 857 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 MAPK8IP1Q9UQF2 711 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 NR2E1Q9Y466 385 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 USP15Q9Y4E8 981 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-223ENST00000557511 CDY1Q9Y6F8 540 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 PLXNA4Q9HCM2 1894 aa8.98□□□□□ -0.97
PSEN1-223ENST00000557511 OR6C75A6NL08 312 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 KPNA7A9QM74 516 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 M0QZQ0 153 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 PIRO00625 290 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 CYB561D2O14569 222 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 PRRG1O14668 218 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 CETN3O15182 167 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 TGM5O43548 720 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 GADD45BO75293 160 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-223ENST00000557511 EFEMP2O95967 443 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 LRG1P02750 347 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 NR3C1P04150 777 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 ITGB3P05106 788 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 HNRNPA1P09651 372 aaKnown RBP eCLIP8.97□□□□□ -0.97
PSEN1-223ENST00000557511 TRIM21P19474 475 aaKnown RBP8.97□□□□□ -0.97
PSEN1-223ENST00000557511 NR2F2P24468 414 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 POLR2BP30876 1174 aaKnown RBP8.97□□□□□ -0.97
PSEN1-223ENST00000557511 SLC19A1P41440 591 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 LILRA4P59901 499 aa8.97□□□□□ -0.97
PSEN1-223ENST00000557511 RBM10P98175 930 aaKnown RBP8.97□□□□□ -0.97
PSEN1-223ENST00000557511 BFSP1Q12934 665 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms