RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 ARPP19P56211 112 aa17.13■□□□□ 0.33
TUBB3-214ENST00000557490 YWHAHQ04917 246 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-214ENST00000557490 MRPL58Q14197 206 aaKnown RBP17.13■□□□□ 0.33
TUBB3-214ENST00000557490 RSPO2Q6UXX9 243 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-214ENST00000557490 CYP26C1Q6V0L0 522 aa17.13■□□□□ 0.33
TUBB3-214ENST00000557490 C15orf39Q6ZRI6 1047 aa17.13■□□□□ 0.33
TUBB3-214ENST00000557490 SENP8Q96LD8 212 aa17.13■□□□□ 0.33
TUBB3-214ENST00000557490 FNBP1Q96RU3 617 aa17.13■□□□□ 0.33
TUBB3-214ENST00000557490 ZDHHC7Q9NXF8 308 aa17.13■□□□□ 0.33
TUBB3-214ENST00000557490 ITGA11Q9UKX5 1188 aa17.13■□□□□ 0.33
TUBB3-214ENST00000557490 R3HCC1Q9Y3T6 440 aaKnown RBP17.13■□□□□ 0.33
TUBB3-214ENST00000557490 PDCD11Q14690 1871 aaKnown RBP17.13■□□□□ 0.33
TUBB3-214ENST00000557490 EP300Q09472 2414 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-214ENST00000557490 CALUO43852 315 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-214ENST00000557490 GADD45BO75293 160 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-214ENST00000557490 PRPF40AO75400 957 aaKnown RBP17.12■□□□□ 0.33
TUBB3-214ENST00000557490 RFPL2O75678 378 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 ZMYND10O75800 440 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 ITGB3P05106 788 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 TYMPP19971 482 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 POLR2BP30876 1174 aaKnown RBP17.12■□□□□ 0.33
TUBB3-214ENST00000557490 RBP5P82980 135 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 CYP24A1Q07973 514 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 PSMD6Q15008 389 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 DUOXA2Q1HG44 320 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 SV2CQ496J9 727 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 SLC8B1Q6J4K2 584 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 WDR49Q8IV35 697 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 CSGALNACT2Q8N6G5 542 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 C1orf127Q8N9H9 656 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 SMARCE1Q969G3 411 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 RPGRIP1Q96KN7 1286 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 OXCT2Q9BYC2 517 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-214ENST00000557490 MTMR12Q9C0I1 747 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 INTS13Q9NVM9 706 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 CDH22Q9UJ99 828 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 FBXL5Q9UKA1 691 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 DSEQ9UL01 958 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 AGAP1Q9UPQ3 857 aa17.12■□□□□ 0.33
TUBB3-214ENST00000557490 TIMM13Q9Y5L4 95 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-214ENST00000557490 CYB561D2O14569 222 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 SPTLC1O15269 473 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 TBC1D4O60343 1298 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 OAZ2O95190 189 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 NR3C1P04150 777 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 C8AP07357 584 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 KRT19P08727 400 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 DLATP10515 647 aaKnown RBP17.11■□□□□ 0.33
TUBB3-214ENST00000557490 AVPR2P30518 371 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 ELF1P32519 619 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 ROR1Q01973 937 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 PPM1LQ5SGD2 360 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 LMBRD2Q68DH5 695 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-214ENST00000557490 OVOS1Q6IE37 1185 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 CCDC149Q6ZUS6 474 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 METTL23Q86XA0 190 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 SLC9A9Q8IVB4 645 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 GUF1Q8N442 669 aaKnown RBP17.11■□□□□ 0.33
TUBB3-214ENST00000557490 ZNF461Q8TAF7 563 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 SMG7Q92540 1137 aaKnown RBP17.11■□□□□ 0.33
TUBB3-214ENST00000557490 CCDC127Q96BQ5 260 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 GSDMAQ96QA5 445 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 RHOBTB2Q9BYZ6 727 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 POMKQ9H5K3 350 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 PIDD1Q9HB75 910 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 MAPK8IP1Q9UQF2 711 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 NR2E1Q9Y466 385 aa17.11■□□□□ 0.33
TUBB3-214ENST00000557490 DNAH14Q0VDD8 3507 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 ACACBO00763 2458 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 OR6C75A6NL08 312 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 KPNA7A9QM74 516 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 LOC730098B7Z3J9 87 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 HNRNPA1P09651 372 aaKnown RBP eCLIP17.1■□□□□ 0.33
TUBB3-214ENST00000557490 TNNI1P19237 187 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 UBE2HP62256 183 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 SIGLEC14Q08ET2 396 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 BFSP1Q12934 665 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 MYBPC2Q14324 1141 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 UVSSAQ2YD98 709 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 RTL10Q7L3V2 364 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 ELOA2Q8IYF1 753 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-214ENST00000557490 LRRC52Q8N7C0 313 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 OR5B17Q8NGF7 314 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 SLC7A14Q8TBB6 771 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 TMEM174Q8WUU8 243 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 ASIC4Q96FT7 647 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 CGRRF1Q99675 332 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 GTPBP4Q9BZE4 634 aaKnown RBP17.1■□□□□ 0.33
TUBB3-214ENST00000557490 PRKD2Q9BZL6 878 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 DMAC2Q9NW81 257 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 TRAF3IP3Q9Y228 551 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 PCDHA5Q9Y5H7 936 aa17.1■□□□□ 0.33
TUBB3-214ENST00000557490 VWA8A3KMH1 1905 aa17.09■□□□□ 0.33
TUBB3-214ENST00000557490 PRRG1O14668 218 aa17.09■□□□□ 0.33
TUBB3-214ENST00000557490 KRT37O76014 449 aa17.09■□□□□ 0.33
TUBB3-214ENST00000557490 CYP11A1P05108 521 aa17.09■□□□□ 0.33
TUBB3-214ENST00000557490 CPB1P15086 417 aa17.09■□□□□ 0.33
TUBB3-214ENST00000557490 MYO1EQ12965 1108 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms