RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 CGRRF1Q99675 332 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 SPATA5L1Q9BVQ7 753 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 B3GNT5Q9BYG0 378 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 NUP62CLQ9H1M0 184 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 TLK1Q9UKI8 766 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 POLHQ9Y253 713 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 STXBP5LQ9Y2K9 1186 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 MYADML2A6NDP7 307 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 A6NNZ2 444 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 TBKBP1A7MCY6 615 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 MGST3O14880 152 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 PHF2O75151 1096 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 C1RP00736 705 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 IGLV2-14P01704 120 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 FTLP02792 175 aaPredicted RBP5.33□□□□□ -1.56
PRPF39-210ENST00000556718 MYL3P08590 195 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 ITGB6P18564 788 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 GPSM2P81274 684 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 MEF2AQ02078 507 aaPredicted RBP5.33□□□□□ -1.56
PRPF39-210ENST00000556718 MGAT2Q10469 447 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 DHX8Q14562 1220 aaKnown RBP5.33□□□□□ -1.56
PRPF39-210ENST00000556718 LONRF1Q17RB8 773 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 ABHD15Q6UXT9 468 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 TOGARAM2Q6ZUX3 1019 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 KIAA0319LQ8IZA0 1049 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 GPR156Q8NFN8 814 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 MDM1Q8TC05 714 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 TFAP2CQ92754 450 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 MANSC1Q9H8J5 431 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 DMRT3Q9NQL9 472 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 FPGT-TNNI3KV9GXZ4 949 aa5.33□□□□□ -1.56
PRPF39-210ENST00000556718 MAST3O60307 1309 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 RPTORQ8N122 1335 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 CFAP69A5D8W1 941 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 B5MCH6 92 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 AKR1B10O60218 316 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 TMEM127O75204 238 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 RBMXL2O75526 392 aaKnown RBP5.32□□□□□ -1.56
PRPF39-210ENST00000556718 ENDOD1O94919 500 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 ARIH2O95376 493 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 ALDH2P05091 517 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 HLA-DOAP06340 250 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 LTA4HP09960 611 aaKnown RBP5.32□□□□□ -1.56
PRPF39-210ENST00000556718 SPATA31D3P0C874 917 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 EDNRBP24530 442 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 FXR1P51114 621 aaKnown RBP eCLIP5.32□□□□□ -1.56
PRPF39-210ENST00000556718 AGFG1P52594 562 aaKnown RBP5.32□□□□□ -1.56
PRPF39-210ENST00000556718 BLOC1S1P78537 153 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 BTKQ06187 659 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 FOXF2Q12947 444 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 SEMA5AQ13591 1074 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 BMT2Q1RMZ1 405 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 C3orf36Q3SXR2 165 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 C1orf228Q6PIY5 440 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 SPATA31D4Q6ZUB0 917 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 GPR149Q86SP6 731 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 KLHDC4Q8TBB5 520 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 RIN2Q8WYP3 895 aaPredicted RBP5.32□□□□□ -1.56
PRPF39-210ENST00000556718 LRTOMTQ8WZ04 291 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 DPF2Q92785 391 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 NELL1Q92832 810 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 KAT5Q92993 513 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 CDC5LQ99459 802 aaKnown RBP5.32□□□□□ -1.56
PRPF39-210ENST00000556718 SELENOOQ9BVL4 669 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 PLCB1Q9NQ66 1216 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 TDP1Q9NUW8 608 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 RNF181Q9P0P0 153 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.32□□□□□ -1.56
PRPF39-210ENST00000556718 SCOCQ9UIL1 159 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 L1RE1Q9UN81 338 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 DMTF1Q9Y222 760 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 PCDHGB6Q9Y5F9 930 aa5.32□□□□□ -1.56
PRPF39-210ENST00000556718 SGTAO43765 313 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 PRAMEF4O60810 478 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 ITGA10O75578 1167 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 C1QL1O75973 258 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 ELANEP08246 267 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 ZKSCAN1P17029 563 aaPredicted RBP5.31□□□□□ -1.56
PRPF39-210ENST00000556718 PEX2P28328 305 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 ECHS1P30084 290 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 CHN2P52757 468 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 PER3P56645 1201 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 IL10RAQ13651 578 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 FGL2Q14314 439 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 POLD3Q15054 466 aaPredicted RBP5.31□□□□□ -1.56
PRPF39-210ENST00000556718 CNN3Q15417 329 aaKnown RBP5.31□□□□□ -1.56
PRPF39-210ENST00000556718 C4orf46Q504U0 113 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 MFSD14BQ5SR56 506 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 ARHGEF25Q86VW2 580 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 RHOT1Q8IXI2 618 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 C3orf20Q8ND61 904 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 VPS37AQ8NEZ2 397 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 CAGE1Q8TC20 777 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 FAM167AQ96KS9 214 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 DUSP26Q9BV47 211 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 NAA15Q9BXJ9 866 aaKnown RBP5.31□□□□□ -1.56
PRPF39-210ENST00000556718 RNF7Q9UBF6 113 aa5.31□□□□□ -1.56
PRPF39-210ENST00000556718 ARHGEF17Q96PE2 2063 aaPredicted RBP5.31□□□□□ -1.56
PRPF39-210ENST00000556718 COL3A1P02461 1466 aaPredicted RBP5.31□□□□□ -1.56
PRPF39-210ENST00000556718 CDKL5O76039 1030 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms