RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 ATRNL1Q5VV63 1379 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 EDF1O60869 148 aaKnown RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 ATP6V1B1P15313 513 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 TNFAIP3P21580 790 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 TBL3Q12788 808 aaKnown RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 ZBTB46Q86UZ6 589 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 ZNF398Q8TD17 642 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 NRG4Q8WWG1 115 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 ERP27Q96DN0 273 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 CEP295NLQ96MC4 621 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 MIPEPQ99797 713 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 CDCA7Q9BWT1 371 aaPredicted RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 DCLRE1BQ9H816 532 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 PSTPIP2Q9H939 334 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 HMX1Q9NP08 348 aaPredicted RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 SAR1AQ9NR31 198 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 STOML1Q9UBI4 398 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 SAP30BPQ9UHR5 308 aaKnown RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 SIPA1L1O43166 1804 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 TRPA1O75762 1119 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 LMNAP02545 664 aaKnown RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 EPHB2P29323 1055 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 KCNJ1P48048 391 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 KLF1Q13351 362 aaPredicted RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 PDK4Q16654 411 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 EPC2Q52LR7 807 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 SLC45A4Q5BKX6 768 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 C1orf220Q5T0J3 134 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 RINT1Q6NUQ1 792 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 ANKS1BQ7Z6G8 1248 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 TRABD2AQ86V40 505 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 SCG3Q8WXD2 468 aaKnown RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 SNF8Q96H20 258 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 HSD17B14Q9BPX1 270 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 PITPNM3Q9BZ71 974 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 DNM3Q9UQ16 869 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 CAPN9O14815 690 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 GRIN3BO60391 1043 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 HNRNPCL1O60812 293 aaKnown RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 LDHCP07864 332 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 STAT4Q14765 748 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 SEL1L2Q5TEA6 688 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 SNX30Q5VWJ9 437 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 ZNF280DQ6N043 979 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 C4orf50Q6ZRC1 276 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 RNF207Q6ZRF8 634 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 CPNE8Q86YQ8 564 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 PRR7Q8TB68 274 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 AGBL1Q96MI9 1066 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 CORO1BQ9BR76 489 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 IKZF4Q9H2S9 585 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 SSU72Q9NP77 194 aaKnown RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 SEPT11Q9NVA2 429 aaKnown RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 KANSL3Q9P2N6 904 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 MTUS1Q9ULD2 1270 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 BARX2Q9UMQ3 279 aaPredicted RBP9.04□□□□□ -0.96
MARK3-210ENST00000556463 SH3GLB1Q9Y371 365 aa9.04□□□□□ -0.96
MARK3-210ENST00000556463 FAM47DPA6NHR8 397 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 C2CD2LO14523 706 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 CLIC2O15247 247 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 TYROBPO43914 113 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 PGM3O95394 542 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 ACSL3O95573 720 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 FGFR1P11362 822 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 PTPN4P29074 926 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 BTDP43251 543 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 AP3B2Q13367 1082 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 ITGA7Q13683 1181 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 CNPY1Q3B7I2 92 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 ZNF720Q7Z2F6 126 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 NOP9Q86U38 636 aaKnown RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 RAVER1Q8IY67 606 aaKnown RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 CCDC105Q8IYK2 499 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 FAM71AQ8IYT1 594 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 PTCD3Q96EY7 689 aaKnown RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 ARPC5LQ9BPX5 153 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 HERPUD2Q9BSE4 406 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 NUP85Q9BW27 656 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 ALG2Q9H553 416 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 PHTF1Q9UMS5 762 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 MAFBQ9Y5Q3 323 aaPredicted RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 RGPD3A6NKT7 1758 aaPredicted RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 RGPD4Q7Z3J3 1758 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 GSTTP1A0A1W2PQM5 241 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 EML1O00423 815 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 MAPK13O15264 365 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 XPOTO43592 962 aaKnown RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 DCTN3O75935 186 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 S100BP04271 92 aaPredicted RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 PIM1P11309 404 aaPredicted RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 KRT17Q04695 432 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 PTP4A2Q12974 167 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 PABPC4Q13310 644 aaKnown RBP eCLIP9.03□□□□□ -0.967e-6■□□□□ 8.5
MARK3-210ENST00000556463 KYNUQ16719 465 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 CCDC174Q6PII3 467 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 SESTD1Q86VW0 696 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 ST13P4Q8IZP2 240 aaPredicted RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 ZBTB8BQ8NAP8 495 aaPredicted RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 DHRS1Q96LJ7 313 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 FAM20AQ96MK3 541 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms