RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 DPH2Q9BQC3 489 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 APOL5Q9BWW9 433 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 TYW1Q9NV66 732 aaKnown RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 ERAP1Q9NZ08 941 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 PADI3Q9ULW8 664 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 MYO7AQ13402 2215 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 SIP14410 1827 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 TBKBP1A7MCY6 615 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 M0QZ92 97 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 PI15O43692 258 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 STK10O94804 968 aaKnown RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 ASGR2P07307 311 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 C1QTNF9P0C862 333 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 LAG3P18627 525 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 SDHBP21912 280 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 GUCY2CP25092 1073 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 GBP1P32455 592 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 ETV3P41162 512 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 SARSP49591 514 aaKnown RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 GATMP50440 423 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 HAND2P61296 217 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 FAM189BP81408 668 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 MRPS9P82933 396 aaKnown RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 KRT17Q04695 432 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 TNK2Q07912 1038 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 BMS1Q14692 1282 aaKnown RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 ODR4Q5SWX8 454 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 MARCH8Q5T0T0 291 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 XRRA1Q6P2D8 792 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 SLC24A5Q71RS6 500 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 NLRX1Q86UT6 975 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 LRRC56Q8IYG6 542 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 KIAA2013Q8IYS2 634 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 MRPL43Q8N983 215 aaKnown RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 C19orf47Q8N9M1 422 aaKnown RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 TDRD5Q8NAT2 981 aaKnown RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 SEPT1Q8WYJ6 367 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 MRPS27Q92552 414 aaKnown RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 GLG1Q92896 1179 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 UBE2FQ969M7 185 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 EVI5LQ96CN4 794 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 MTMR8Q96EF0 704 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 TCF25Q9BQ70 676 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 CELF4Q9BZC1 486 aaKnown RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 SMARCAD1Q9H4L7 1026 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 POMKQ9H5K3 350 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 ENTPD7Q9NQZ7 604 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 CYP26B1Q9NR63 512 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 C1orf112Q9NSG2 853 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 DLL3Q9NYJ7 618 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 RTEL1Q9NZ71 1219 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 TUBE1Q9UJT0 475 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 TRPV2Q9Y5S1 764 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 SLC12A7Q9Y666 1083 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 TANC1Q9C0D5 1861 aa5.53□□□□□ -1.52
ATXN3-239ENST00000556315 RIF1Q5UIP0 2472 aaKnown RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 TRIP12Q14669 1992 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-239ENST00000556315 PTPRSQ13332 1948 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 ZMYM6O95789 1325 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 IGSF9BQ9UPX0 1349 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 CFAP54Q96N23 3096 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 GSTTP1A0A1W2PQM5 241 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 HIDE1A8MVS5 230 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 KLRF2D3W0D1 207 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 ZNF213O14771 459 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 RGS13O14921 159 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 PPP1R11O60927 126 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-239ENST00000556315 CBX7O95931 251 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 ESR1P03372 595 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 CENPBP07199 599 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-239ENST00000556315 INSRRP14616 1297 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 MX1P20591 662 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 TCF7P36402 384 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-239ENST00000556315 IGBP1P78318 339 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 SP4Q02446 784 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 TDGQ13569 410 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 FAM102BQ5T8I3 360 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 PLPP4Q5VZY2 271 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 CWF19L1Q69YN2 538 aaKnown RBP5.52□□□□□ -1.53
ATXN3-239ENST00000556315 TMPRSS7Q7RTY8 843 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 TBC1D10CQ8IV04 446 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 COLGALT1Q8NBJ5 622 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 CYP2W1Q8TAV3 490 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 PIWIL2Q8TC59 973 aaKnown RBP5.52□□□□□ -1.53
ATXN3-239ENST00000556315 RUBCNQ92622 972 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 BORCS6Q96GS4 357 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 CDHR1Q96JP9 859 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 KIF2CQ99661 725 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATXN3-239ENST00000556315 FAM49AQ9H0Q0 323 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-239ENST00000556315 TMX1Q9H3N1 280 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 SMOC2Q9H3U7 446 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 CWH43Q9H720 699 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 ATP6V0A4Q9HBG4 840 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 RGS18Q9NS28 235 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 ZSWIM5Q9P217 1185 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 DBR1Q9UK59 544 aaKnown RBP5.52□□□□□ -1.53
ATXN3-239ENST00000556315 CEP131Q9UPN4 1083 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 R3HCC1Q9Y3T6 440 aaKnown RBP5.52□□□□□ -1.53
ATXN3-239ENST00000556315 TELO2Q9Y4R8 837 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms