RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 OVGP1Q12889 678 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 TFDP1Q14186 410 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 EFCAB12Q6NXP0 572 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 YTHDF3Q7Z739 585 aaKnown RBP15.68■□□□□ 0.1
CUX1-215ENST00000556210 CD302Q8IX05 232 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 FAM71DQ8N9W8 422 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 FEZF2Q8TBJ5 459 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 RNF181Q9P0P0 153 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 MYH15Q9Y2K3 1946 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 MT-ND3P03897 115 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 ITGB3P05106 788 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 CFHP08603 1231 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 SUPT20HL2P0C7V6 817 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 GZMAP12544 262 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 CREB1P16220 341 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 MAGEA4P43358 317 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 JAM2P57087 298 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 LMNTD2Q8IXW0 634 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 MREGQ8N565 214 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 NSMCE1Q8WV22 266 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 CPB2Q96IY4 423 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 FAM81BQ96LP2 452 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 IP6K2Q9UHH9 426 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 SNX9Q9Y5X1 595 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 VTNP04004 478 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 GTF2BQ00403 316 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 CLEC16AQ2KHT3 1053 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 DCAF12L1Q5VU92 463 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 MFSD7Q6UXD7 560 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 CLEC4DQ8WXI8 215 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 MED10Q9BTT4 135 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 TRAIPQ9BWF2 469 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 POLIQ9UNA4 740 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 USP54Q70EL1 1684 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 ZC3H4Q9UPT8 1303 aaKnown RBP15.67■□□□□ 0.1
CUX1-215ENST00000556210 CAPN9O14815 690 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 SKAP2O75563 359 aaPredicted RBP15.67■□□□□ 0.1
CUX1-215ENST00000556210 CXCL8P10145 99 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 P4HA1P13674 534 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 PTPRAP18433 802 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 KIF22Q14807 665 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 TAF11Q15544 211 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 MAP4K3Q8IVH8 894 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 FAM71AQ8IYT1 594 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 ATXN7L3BQ96GX2 97 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 RBM41Q96IZ5 413 aaKnown RBP15.67■□□□□ 0.1
CUX1-215ENST00000556210 MRIQ9BWK5 157 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 ETNK1Q9HBU6 452 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 CISHQ9NSE2 258 aa15.67■□□□□ 0.1
CUX1-215ENST00000556210 P4HA2O15460 535 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 DDX3YO15523 660 aaKnown RBP15.66■□□□□ 0.1
CUX1-215ENST00000556210 LMNB2Q03252 620 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 TDRD10Q5VZ19 366 aaKnown RBP15.66■□□□□ 0.1
CUX1-215ENST00000556210 CATSPER4Q7RTX7 472 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 BBOF1Q8ND07 529 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 PIH1D1Q9NWS0 290 aaKnown RBP15.66■□□□□ 0.1
CUX1-215ENST00000556210 DNPEPQ9ULA0 475 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 L3MBTL1Q9Y468 752 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 UTRNP46939 3433 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 TBXAS1P24557 533 aaPredicted RBP15.66■□□□□ 0.1
CUX1-215ENST00000556210 PHBP35232 272 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 GPRASP2Q96D09 838 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 MBOAT7Q96N66 472 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 METTL5Q9NRN9 209 aaKnown RBP15.66■□□□□ 0.1
CUX1-215ENST00000556210 DONSONQ9NYP3 566 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 NUB1Q9Y5A7 615 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 RIPK2O43353 540 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 SLC26A4O43511 780 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 ENOSF1Q7L5Y1 443 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 NETO2Q8NC67 525 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 SHC3Q92529 594 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 MAML1Q92585 1016 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 KIF12Q96FN5 646 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 RPS6KC1Q96S38 1066 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 MARCOQ9UEW3 520 aaPredicted RBP15.66■□□□□ 0.1
CUX1-215ENST00000556210 ADAMTS7Q9UKP4 1686 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 ZMYM2Q9UBW7 1377 aa15.66■□□□□ 0.1
CUX1-215ENST00000556210 ZBED1O96006 694 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 APRTP07741 180 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 PDGFRAP16234 1089 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 ITIH2P19823 946 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 TAS2R40P59535 323 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 YWHAEP62258 255 aaKnown RBP15.65■□□□□ 0.1
CUX1-215ENST00000556210 MDH1BQ5I0G3 518 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 TRABDQ9H4I3 376 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 ADM5C9JUS6 153 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 AGTP01019 485 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 CALB1P05937 261 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 PTGER2P43116 358 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 EIF3EP60228 445 aaKnown RBP15.65■□□□□ 0.1
CUX1-215ENST00000556210 TRPM4Q8TD43 1214 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 A6NJR5 290 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 CST3P01034 146 aaPredicted RBP15.65■□□□□ 0.1
CUX1-215ENST00000556210 RBP3P10745 1247 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 ATF7IP2Q5U623 682 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 EP400NLQ6ZTU2 488 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 C3orf62Q6ZUJ4 267 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 STAMBPL1Q96FJ0 436 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 PCDHA3Q9Y5H8 950 aa15.65■□□□□ 0.1
CUX1-215ENST00000556210 PHLPP1O60346 1717 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms