RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 SIK3Q9Y2K2 1263 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 NME7Q9Y5B8 376 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 CARNS1A5YM72 827 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 FSCN2O14926 492 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 HCRTO43612 131 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 TRAPPC3O43617 180 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 SERPINC1P01008 464 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 WEE2P0C1S8 567 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 RAP1GAPP47736 663 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 TPM4P67936 248 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 UBXN1Q04323 297 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 EXOC3L4Q17RC7 722 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 ZNF667Q5HYK9 610 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 TRIM65Q6PJ69 517 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 PRSS55Q6UWB4 352 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-210ENST00000556166 GBP6Q6ZN66 633 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 OSTM1Q86WC4 334 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 CEP57Q86XR8 500 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 ANKRD20A12PQ8NF67 263 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 LNX1Q8TBB1 728 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-210ENST00000556166 KBTBD7Q8WVZ9 684 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 KAT5Q92993 513 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 FAM161BQ96MY7 647 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 MRPL45Q9BRJ2 306 aaKnown RBP12.3□□□□□ -0.44
GABRB3-210ENST00000556166 TTPALQ9BTX7 342 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 HERC2P3Q9BVR0 1158 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 ZBP1Q9H171 429 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 PRDM12Q9H4Q4 367 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 IFNKQ9P0W0 207 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 GCNT4Q9P109 453 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 AJAP1Q9UKB5 411 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-210ENST00000556166 R3HCC1Q9Y3T6 440 aaKnown RBP12.3□□□□□ -0.44
GABRB3-210ENST00000556166 TMEM265A0A087WTH1 108 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 EPHB6O15197 1021 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 ADAM12O43184 909 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 TBC1D4O60343 1298 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 NOL4O94818 638 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 OAZ2O95190 189 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 CSPG5O95196 566 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 CXCL14O95715 111 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 CYP11A1P05108 521 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 CTSAP10619 480 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 TYMPP19971 482 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 PAX3P23760 479 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 DSG1Q02413 1049 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 UBE3AQ05086 875 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 ELAVL2Q12926 359 aaKnown RBP12.3□□□□□ -0.44
GABRB3-210ENST00000556166 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 USP41Q3LFD5 358 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 WDR44Q5JSH3 913 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 VARS2Q5ST30 1063 aaKnown RBP12.3□□□□□ -0.44
GABRB3-210ENST00000556166 SCARA5Q6ZMJ2 495 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-210ENST00000556166 Q7L0L9 218 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 RRAGAQ7L523 313 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 TOP6BLQ8N6T0 577 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 RIN2Q8WYP3 895 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-210ENST00000556166 KREMEN1Q96MU8 473 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 BCO2Q9BYV7 579 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 PUF60Q9UHX1 559 aaKnown RBP12.3□□□□□ -0.44
GABRB3-210ENST00000556166 KIAA1671Q9BY89 1806 aa12.3□□□□□ -0.44
GABRB3-210ENST00000556166 CDH23Q9H251 3354 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 SZT2Q5T011 3432 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 C2CD2LO14523 706 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 GABRDO14764 452 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 SYN3O14994 580 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 HUS1O60921 280 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 RPL17P18621 184 aaKnown RBP12.29□□□□□ -0.44
GABRB3-210ENST00000556166 LMO2P25791 158 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 PBX1P40424 430 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 FXR1P51114 621 aaKnown RBP eCLIP12.29□□□□□ -0.44
GABRB3-210ENST00000556166 UBASH3AP57075 661 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 CETN1Q12798 172 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 SYCP1Q15431 976 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 PTPN14Q15678 1187 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 FKBP15Q5T1M5 1219 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 KLHDC7AQ5VTJ3 777 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 MRPL43Q8N983 215 aaKnown RBP12.29□□□□□ -0.44
GABRB3-210ENST00000556166 APPL2Q8NEU8 664 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 ERGIC2Q96RQ1 377 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 TCF25Q9BQ70 676 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 XPO4Q9C0E2 1151 aaKnown RBP12.29□□□□□ -0.44
GABRB3-210ENST00000556166 NIF3L1Q9GZT8 377 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 GRPEL1Q9HAV7 217 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 TLR9Q9NR96 1032 aa12.29□□□□□ -0.44
GABRB3-210ENST00000556166 TRANK1O15050 2925 aa12.28□□□□□ -0.44
GABRB3-210ENST00000556166 C2orf71A6NGG8 1288 aa12.28□□□□□ -0.44
GABRB3-210ENST00000556166 TACC1O75410 805 aa12.28□□□□□ -0.44
GABRB3-210ENST00000556166 TPM2P07951 284 aa12.28□□□□□ -0.44
GABRB3-210ENST00000556166 ODC1P11926 461 aa12.28□□□□□ -0.44
GABRB3-210ENST00000556166 ACO1P21399 889 aaKnown RBP12.28□□□□□ -0.44
GABRB3-210ENST00000556166 WARSP23381 471 aaKnown RBP12.28□□□□□ -0.44
GABRB3-210ENST00000556166 GLUD2P49448 558 aa12.28□□□□□ -0.44
GABRB3-210ENST00000556166 TNNC1P63316 161 aa12.28□□□□□ -0.44
GABRB3-210ENST00000556166 CUL2Q13617 745 aa12.28□□□□□ -0.44
GABRB3-210ENST00000556166 PLPP4Q5VZY2 271 aa12.28□□□□□ -0.44
GABRB3-210ENST00000556166 OVOS1Q6IE37 1185 aa12.28□□□□□ -0.44
GABRB3-210ENST00000556166 DPH6Q7L8W6 267 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms