RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 CCDC183Q5T5S1 534 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 KIAA0319Q5VV43 1072 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 C2orf16Q68DN1 1984 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 TMC7Q7Z402 723 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 WDR49Q8IV35 697 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 MICAL1Q8TDZ2 1067 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 PARD3BQ8TEW8 1205 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 BORCS6Q96GS4 357 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 HS3ST6Q96QI5 342 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 TSG101Q99816 390 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 NSUN3Q9H649 340 aaKnown RBP9.69□□□□□ -0.86
CHD8-210ENST00000555962 ENTPD7Q9NQZ7 604 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 CHST7Q9NS84 486 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 SIX4Q9UIU6 781 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 TSR3Q9UJK0 312 aaKnown RBP9.69□□□□□ -0.86
CHD8-210ENST00000555962 STXBP5LQ9Y2K9 1186 aa9.69□□□□□ -0.86
CHD8-210ENST00000555962 SF3B1O75533 1304 aaKnown RBP eCLIP9.68□□□□□ -0.863e-6■■■■■ 137.9
CHD8-210ENST00000555962 C2orf71A6NGG8 1288 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 C2CD2LO14523 706 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 PER2O15055 1255 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 CETN3O15182 167 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 HRO43593 1189 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 CXCL14O95715 111 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 ITGB3P05106 788 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 TMEM191BP0C7N4 346 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 TRIM49P0CI25 452 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 TRIM49CP0CI26 452 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 TNNI1P19237 187 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 FGFR3P22607 806 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 TKTP29401 623 aaKnown RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 POLR2BP30876 1174 aaKnown RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 PSMC2P35998 433 aaKnown RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 GLUD2P49448 558 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 AARSP49588 968 aaKnown RBP eCLIP9.68□□□□□ -0.868e-6■■■■■ 52.4
CHD8-210ENST00000555962 LILRA4P59901 499 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 MCCD1P59942 119 aaPredicted RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 CLDN10P78369 228 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 FKBP3Q00688 224 aaKnown RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 DSG1Q02413 1049 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 SMC1AQ14683 1233 aaKnown RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 KLHL40Q2TBA0 621 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 USP41Q3LFD5 358 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 FAM171A1Q5VUB5 890 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 CAVIN1Q6NZI2 390 aaKnown RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 PRSS55Q6UWB4 352 aaPredicted RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 TRAPPC11Q7Z392 1133 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 FAM186BQ8IYM0 893 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 MRPL43Q8N983 215 aaKnown RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 MLKLQ8NB16 471 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 MAFAQ8NHW3 353 aaPredicted RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 CACTINQ8WUQ7 758 aaKnown RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 PPM1EQ8WY54 764 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 NGRNQ9NPE2 291 aaKnown RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 AGAP1Q9UPQ3 857 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 FRMD4BQ9Y2L6 1034 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 NUB1Q9Y5A7 615 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.68□□□□□ -0.86
CHD8-210ENST00000555962 IRAK3Q9Y616 596 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 PTPRDP23468 1912 aa9.68□□□□□ -0.86
CHD8-210ENST00000555962 MYH10P35580 1976 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 TCF20Q9UGU0 1960 aaKnown RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 CST3P01034 146 aaPredicted RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 TNNC2P02585 160 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 C4BPAP04003 597 aaKnown RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 URODP06132 367 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 CNPP09543 421 aaKnown RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 RPL17P18621 184 aaKnown RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 CA8P35219 290 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 NRIP1P48552 1158 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 VAMP7P51809 220 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 RBM10P98175 930 aaKnown RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 HYAL1Q12794 435 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 ELAVL2Q12926 359 aaKnown RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 BFSP1Q12934 665 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 DUOXA2Q1HG44 320 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 PDE12Q6L8Q7 609 aaKnown RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 FOXR2Q6PJQ5 311 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 INTS8Q75QN2 995 aaKnown RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 RBM23Q86U06 439 aaKnown RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 CEP57Q86XR8 500 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 CSGALNACT2Q8N6G5 542 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 LNX1Q8TBB1 728 aaPredicted RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 RIN2Q8WYP3 895 aaPredicted RBP9.67□□□□□ -0.86
CHD8-210ENST00000555962 ANKRD36BP1Q96IX9 119 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 SUSD3Q96L08 255 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 FNBP1Q96RU3 617 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 TTPALQ9BTX7 342 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 MKNK1Q9BUB5 465 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 RWDD2AQ9UIY3 292 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 ITGA11Q9UKX5 1188 aa9.67□□□□□ -0.86
CHD8-210ENST00000555962 BICDL2A1A5D9 508 aa9.66□□□□□ -0.86
CHD8-210ENST00000555962 M0QZQ0 153 aa9.66□□□□□ -0.86
CHD8-210ENST00000555962 SLC16A3O15427 465 aaKnown RBP9.66□□□□□ -0.86
CHD8-210ENST00000555962 LINC01565O15544 149 aa9.66□□□□□ -0.86
CHD8-210ENST00000555962 TRAPPC3O43617 180 aa9.66□□□□□ -0.86
CHD8-210ENST00000555962 CLASP2O75122 1294 aaKnown RBP9.66□□□□□ -0.86
CHD8-210ENST00000555962 VNN1O95497 513 aa9.66□□□□□ -0.86
CHD8-210ENST00000555962 KRT19P08727 400 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms