RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 DPY19L2P1Q6NXN4 242 aa10.9□□□□□ -0.67
NEK9-205ENST00000555405 CCAR2Q8N163 923 aaKnown RBP10.9□□□□□ -0.67
NEK9-205ENST00000555405 UBA3Q8TBC4 463 aa10.9□□□□□ -0.67
NEK9-205ENST00000555405 XYLT2Q9H1B5 865 aa10.9□□□□□ -0.67
NEK9-205ENST00000555405 MTUS1Q9ULD2 1270 aa10.9□□□□□ -0.67
NEK9-205ENST00000555405 ZSCAN12O43309 604 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 ATMINO43313 823 aaPredicted RBP10.89□□□□□ -0.67
NEK9-205ENST00000555405 TADA2AO75478 443 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 CAPN15O75808 1086 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 ITGB1P05556 798 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 ADORA2BP29275 332 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 DEFB103AP81534 67 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 DSC3Q14574 896 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 NAA35Q5VZE5 725 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 TMEM199Q8N511 208 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 GSTCDQ8NEC7 633 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 SENP8Q96LD8 212 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 TWNKQ96RR1 684 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 NAA15Q9BXJ9 866 aaKnown RBP10.89□□□□□ -0.67
NEK9-205ENST00000555405 FTHL17Q9BXU8 183 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 EDEM3Q9BZQ6 932 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 RGS18Q9NS28 235 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 CNTN3Q9P232 1028 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 TBX21Q9UL17 535 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 DDHD2O94830 711 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 CYP11B1P15538 503 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 TBXAS1P24557 533 aaPredicted RBP10.89□□□□□ -0.67
NEK9-205ENST00000555405 KCNJ6P48051 423 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 RABGGTBP53611 331 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 IFRD2Q12894 506 aaPredicted RBP10.89□□□□□ -0.67
NEK9-205ENST00000555405 CLLU1OSQ5K130 101 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 HGSNATQ68CP4 663 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 APPL2Q8NEU8 664 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 SHC3Q92529 594 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 TOX2Q96NM4 488 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 AGPAT1Q99943 283 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 LACRTQ9GZZ8 138 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 SYNCQ9H7C4 482 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 PCDHA13Q9Y5I0 950 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 CITO14578 2027 aa10.89□□□□□ -0.67
NEK9-205ENST00000555405 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.88□□□□□ -0.67
NEK9-205ENST00000555405 LMO2P25791 158 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 LILRA4P59901 499 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 CLDN10P78369 228 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 KIF5AQ12840 1032 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 ZNF569Q5MCW4 686 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 LLGL2Q6P1M3 1020 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 SYT10Q6XYQ8 523 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 ZNF365Q70YC5 407 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 IQCDQ96DY2 449 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 CYFIP2Q96F07 1278 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 PPP1R13BQ96KQ4 1090 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 PSMB7Q99436 277 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 MED10Q9BTT4 135 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 GPR88Q9GZN0 384 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 SLC38A7Q9NVC3 462 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 AIPL1Q9NZN9 384 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 DNAI1Q9UI46 699 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 DDX3XO00571 662 aaKnown RBP eCLIP10.88□□□□□ -0.67
NEK9-205ENST00000555405 ZNF263O14978 683 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 ATP2C2O75185 946 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 SKIP12755 728 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 GNL1P36915 607 aaPredicted RBP10.88□□□□□ -0.67
NEK9-205ENST00000555405 RNASE9P60153 205 aaKnown RBP10.88□□□□□ -0.67
NEK9-205ENST00000555405 KRT83P78385 493 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 ANKLE1Q8NAG6 615 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 C3orf58Q8NDZ4 430 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 LBHD1Q9BQE6 289 aaPredicted RBP10.88□□□□□ -0.67
NEK9-205ENST00000555405 GOLPH3Q9H4A6 298 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 TBC1D13Q9NVG8 400 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 RCCD1A6NED2 376 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 B4GALT3O60512 393 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 CAND2O75155 1236 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 TIMP1P01033 207 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 FTLP02792 175 aaPredicted RBP10.88□□□□□ -0.67
NEK9-205ENST00000555405 SSR1P43307 286 aaKnown RBP10.88□□□□□ -0.67
NEK9-205ENST00000555405 RGS7P49802 495 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 GCNT1Q02742 428 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 ZNF560Q96MR9 790 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 YME1L1Q96TA2 773 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 DPEP3Q9H4B8 488 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 HYOU1Q9Y4L1 999 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 SCN1AP35498 2009 aa10.88□□□□□ -0.67
NEK9-205ENST00000555405 ZNF623O75123 536 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 ASPAP45381 313 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 JAM2P57087 298 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 ALKAL1Q6UXT8 129 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 FAM71AQ8IYT1 594 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 LNX1Q8TBB1 728 aaPredicted RBP10.87□□□□□ -0.67
NEK9-205ENST00000555405 EPS8L1Q8TE68 723 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 C11orf70Q9BRQ4 267 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 GOLGA8SH3BPF8 625 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 BTG3Q14201 252 aaPredicted RBP10.87□□□□□ -0.67
NEK9-205ENST00000555405 MEA1Q16626 185 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 SV2CQ496J9 727 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 TIGD5Q53EQ6 642 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 ADGRF2Q8IZF7 708 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 TMEM174Q8WUU8 243 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 ZNF606Q8WXB4 792 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 KCNN1Q92952 543 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms