RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 FGFR4P22455 802 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 EIF4BP23588 611 aaKnown RBP13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 TREML2Q5T2D2 321 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 SLC35B2Q8TB61 432 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 ZNF606Q8WXB4 792 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 IFT74Q96LB3 600 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 FBXO40Q9UH90 709 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 SCINQ9Y6U3 715 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 ERLIN2O94905 339 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 GJB6O95452 261 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 GSTA1P08263 222 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 CCDC13Q8IYE1 715 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 RBBP8NLQ8NC74 664 aaPredicted RBP13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 GRK7Q8WTQ7 553 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 WDR83Q9BRX9 315 aaKnown RBP13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 E7ESA3 106 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 CDKN2BP42772 138 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 ITGA8P53708 1063 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 CNTN2Q02246 1040 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 MAMDC4Q6UXC1 1216 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 MICALCLQ6ZW33 695 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 C1orf54Q8WWF1 131 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 TMEM143Q96AN5 459 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 GPR20Q99678 358 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 MTRF1LQ9UGC7 380 aaKnown RBP13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 CYTH4Q9UIA0 394 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 ITGAVP06756 1048 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 RALAP11233 206 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 HNRNPH1P31943 449 aaKnown RBP13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 AMHR2Q16671 573 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 TTC31Q49AM3 519 aaPredicted RBP13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 SGO2Q562F6 1265 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 FAM228AQ86W67 206 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 CYP4X1Q8N118 509 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 ZNF276Q8N554 614 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 JDP2Q8WYK2 163 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 TRIM31Q9BZY9 425 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 R3HDMLQ9H3Y0 253 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 MRPL47Q9HD33 250 aaKnown RBP13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 PARVAQ9NVD7 372 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 CITO14578 2027 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 hCG_1818297A0A087WSY0 165 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 SPOPO43791 374 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 STAU1O95793 577 aaKnown RBP13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 HPDP32754 393 aaPredicted RBP13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 ACOT2P49753 483 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 LIG4P49917 911 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 TBC1D10BQ4KMP7 808 aaPredicted RBP13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 METTL7BQ6UX53 244 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 MMS22LQ6ZRQ5 1243 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 RCOR2Q8IZ40 523 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 ATG4AQ8WYN0 398 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 ANKFY1Q9P2R3 1169 aa13.38□□□□□ -0.27
PPP4R3A-206ENST00000554943 TOM1L1O75674 476 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 ARIH2O95376 493 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 C1QAP02745 245 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 ALADP13716 330 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 GNA15P30679 374 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 TNFSF9P41273 254 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 EAPPQ56P03 285 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 RNASEH2BQ5TBB1 312 aaKnown RBP13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 CKAP2Q8WWK9 683 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 TARS2Q9BW92 718 aaKnown RBP13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 IP6K2Q9UHH9 426 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 MGRN1O60291 552 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 PIK3CAP42336 1068 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 EFNA5P52803 228 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 RPL7AP62424 266 aaKnown RBP13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 ACVR2BQ13705 512 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 DAB2IPQ5VWQ8 1189 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 RIBC1Q8N443 379 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 GLIS1Q8NBF1 620 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 TFAP2BQ92481 460 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 OSBPL8Q9BZF1 889 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 SSU72Q9NP77 194 aaKnown RBP13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 CYLDQ9NQC7 956 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 GTF2IRD1Q9UHL9 959 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 KCNH4Q9UQ05 1017 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 PRPF4O43172 522 aaKnown RBP eCLIP13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 TAP1Q03518 808 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 MTERF2Q49AM1 385 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 CCDC105Q8IYK2 499 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 KIAA0319LQ8IZA0 1049 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 FRMD8P1Q9BZ68 369 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 SIX4Q9UIU6 781 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 EVPLQ92817 2033 aa13.37□□□□□ -0.27
PPP4R3A-206ENST00000554943 TMEM110-MUSTN1A8MSY1 372 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 NSFP46459 744 aaKnown RBP13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 NCOA4Q13772 614 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 IER5Q5VY09 327 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 PPANQ9NQ55 473 aaKnown RBP13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 FZD1Q9UP38 647 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 SCN4AP35499 1836 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms