RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 TAF11Q15544 211 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 DLK2Q6UY11 383 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 PPP1R13LQ8WUF5 828 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 CFAP57Q96MR6 1250 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 MAK16Q9BXY0 300 aaKnown RBP12.53□□□□□ -0.4
XRCC3-208ENST00000554811 MAD1L1Q9Y6D9 718 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 FAM47DPA6NHR8 397 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 CYP1A2P05177 515 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 MSH2P43246 934 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 CDH8P55286 799 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 C1orf228Q6PIY5 440 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 LVRNQ6Q4G3 990 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 MAML1Q92585 1016 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 C2orf71A6NGG8 1288 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 NOP56O00567 594 aaKnown RBP12.53□□□□□ -0.4
XRCC3-208ENST00000554811 CST8O60676 142 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 RPA3P35244 121 aaPredicted RBP12.53□□□□□ -0.4
XRCC3-208ENST00000554811 BPIFB4P59827 614 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 MYL6P60660 151 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 CNTN2Q02246 1040 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 CUL2Q13617 745 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 PPP2R5DQ14738 602 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 CASC4Q6P4E1 433 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 SLC39A4Q6P5W5 647 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 VSTM1Q6UX27 236 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 SLC9A9Q8IVB4 645 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 EIF1ADQ8N9N8 165 aaKnown RBP12.53□□□□□ -0.4
XRCC3-208ENST00000554811 KCTD6Q8NC69 237 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 PPP1R14CQ8TAE6 165 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 ZNF516Q92618 1163 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 SLC13A1Q9BZW2 595 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 CYP26B1Q9NR63 512 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 AAASQ9NRG9 546 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 PHTF1Q9UMS5 762 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 NUB1Q9Y5A7 615 aa12.53□□□□□ -0.4
XRCC3-208ENST00000554811 SLC26A4O43511 780 aa12.52□□□□□ -0.4
XRCC3-208ENST00000554811 PROSCO94903 275 aa12.52□□□□□ -0.4
XRCC3-208ENST00000554811 PAX7P23759 505 aa12.52□□□□□ -0.4
XRCC3-208ENST00000554811 NCALDP61601 193 aa12.52□□□□□ -0.4
XRCC3-208ENST00000554811 TTLL12Q14166 644 aaPredicted RBP12.52□□□□□ -0.4
XRCC3-208ENST00000554811 SPARCL1Q14515 664 aa12.52□□□□□ -0.4
XRCC3-208ENST00000554811 FAM228AQ86W67 206 aa12.52□□□□□ -0.4
XRCC3-208ENST00000554811 FAM71DQ8N9W8 422 aa12.52□□□□□ -0.4
XRCC3-208ENST00000554811 PTPRJQ12913 1337 aa12.52□□□□□ -0.4
XRCC3-208ENST00000554811 ZBTB48P10074 688 aaPredicted RBP12.52□□□□□ -0.41
XRCC3-208ENST00000554811 GCKP35557 465 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 CXCL9Q07325 125 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 TFDP1Q14186 410 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 PPP6R3Q5H9R7 873 aaPredicted RBP12.52□□□□□ -0.41
XRCC3-208ENST00000554811 FYB2Q5VWT5 728 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 VPS52Q8N1B4 723 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 NETO2Q8NC67 525 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 TRAPPC12Q8WVT3 735 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 CLEC4DQ8WXI8 215 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 MCUR1Q96AQ8 359 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 SERPINB12Q96P63 405 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 SYT11Q9BT88 431 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.52□□□□□ -0.41
XRCC3-208ENST00000554811 TJP2Q9UDY2 1190 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 SUFUQ9UMX1 484 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.52□□□□□ -0.41
XRCC3-208ENST00000554811 TJP3O95049 919 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 MMP14P50281 582 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 WDR72Q3MJ13 1102 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 C3orf62Q6ZUJ4 267 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 MAP4K3Q8IVH8 894 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 RNF149Q8NC42 400 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 MCPH1Q8NEM0 835 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 OLIG1Q8TAK6 271 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 NGRNQ9NPE2 291 aaKnown RBP12.52□□□□□ -0.41
XRCC3-208ENST00000554811 METTL5Q9NRN9 209 aaKnown RBP12.52□□□□□ -0.41
XRCC3-208ENST00000554811 PIH1D1Q9NWS0 290 aaKnown RBP12.52□□□□□ -0.41
XRCC3-208ENST00000554811 NOP53Q9NZM5 478 aaKnown RBP12.52□□□□□ -0.41
XRCC3-208ENST00000554811 WHRNQ9P202 907 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 NENFQ9UMX5 172 aa12.52□□□□□ -0.41
XRCC3-208ENST00000554811 P4HA2O15460 535 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 ASAP2O43150 1006 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 FOXN2P32314 431 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 PSMC1P62191 440 aaKnown RBP12.51□□□□□ -0.41
XRCC3-208ENST00000554811 CENPUQ71F23 418 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 ANKS1BQ7Z6G8 1248 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 C4orf19Q8IY42 314 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 FEZF2Q8TBJ5 459 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
XRCC3-208ENST00000554811 SENP7Q9BQF6 1050 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 MYLK2Q9H1R3 596 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 ZNF302Q9NR11 478 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 MAST2Q6P0Q8 1798 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 FSCN2O14926 492 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 DGAT1O75907 488 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 DPEP1P16444 411 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 RGS7P49802 495 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 RAD23BP54727 409 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 MAMLD1Q13495 774 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 HIF1AQ16665 826 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 DARS2Q6PI48 645 aaKnown RBP12.51□□□□□ -0.41
XRCC3-208ENST00000554811 CEP120Q8N960 986 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 UBA3Q8TBC4 463 aa12.51□□□□□ -0.41
XRCC3-208ENST00000554811 ASAP3Q8TDY4 903 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms