RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 GLIS1Q8NBF1 620 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 MCPH1Q8NEM0 835 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 FLAD1Q8NFF5 587 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 FAM167BQ9BTA0 163 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 ALG13Q9NP73 1137 aaKnown RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 RNF146Q9NTX7 359 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 RBAKQ9NYW8 714 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 GOLGA8RI6L899 631 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 EXTL3O43909 919 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 OAS1P00973 400 aaKnown RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 NR3C2P08235 984 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 FDX1P10109 184 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 RPL7AP62424 266 aaKnown RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 CUL2Q13617 745 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 FASTKD3Q14CZ7 662 aaKnown RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 STYK1Q6J9G0 422 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 ZNF677Q86XU0 584 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 ABRAQ8N0Z2 381 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 EXD1Q8NHP7 514 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 MIEF2Q96C03 454 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 RBM41Q96IZ5 413 aaKnown RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 KLF6Q99612 283 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 MSTO1Q9BUK6 570 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 DCTN4Q9UJW0 460 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 ADGRA3Q8IWK6 1321 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 K7ERI5 159 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 ZNF862O60290 1169 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 DKC1O60832 514 aaKnown RBP eCLIP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 BANF1O75531 89 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 SKAP2O75563 359 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 PSAPP07602 524 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 GARTP22102 1010 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 CCND2P30279 289 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 TMEM132AQ24JP5 1023 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 GALNTL6Q49A17 601 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 TDRD10Q5VZ19 366 aaKnown RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 CENPUQ71F23 418 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 ZCCHC9Q8N567 271 aaKnown RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 SPIRE2Q8WWL2 714 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 MCEEQ96PE7 176 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 SENP7Q9BQF6 1050 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 TARS2Q9BW92 718 aaKnown RBP10.05□□□□□ -0.8
SYNE2-213ENST00000554805 C10orf88Q9H8K7 445 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 ZWILCHQ9H900 591 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 PXMP2Q9NR77 195 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 PARVAQ9NVD7 372 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 IP6K2Q9UHH9 426 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 USH1CQ9Y6N9 552 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 FOCADQ5VW36 1801 aa10.05□□□□□ -0.8
SYNE2-213ENST00000554805 DNALI1O14645 258 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-213ENST00000554805 WDR46O15213 610 aaKnown RBP10.04□□□□□ -0.8
SYNE2-213ENST00000554805 ZC3H11AO75152 810 aaKnown RBP eCLIP10.04□□□□□ -0.8
SYNE2-213ENST00000554805 DGAT1O75907 488 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 ATP2A2P16615 1042 aaKnown RBP10.04□□□□□ -0.8
SYNE2-213ENST00000554805 PRKCEQ02156 737 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 ZBTB16Q05516 673 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 NR1H3Q13133 447 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 TAF11Q15544 211 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 TRIM72Q6ZMU5 477 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 MON1BQ7L1V2 547 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 KATNAL2Q8IYT4 538 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 RCOR2Q8IZ40 523 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 C7orf43Q8WVR3 580 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 TMEM121Q9BTD3 319 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 KIAA1586Q9HCI6 787 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 LGALS13Q9UHV8 139 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 IVNS1ABPQ9Y6Y0 642 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 PLA2G6O60733 806 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 CD19P15391 556 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 TCF4P15884 667 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 PAX7P23759 505 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 NOMO3P69849 1222 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 BBS9Q3SYG4 887 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 SPDYE2Q495Y8 402 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 FYB2Q5VWT5 728 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 RNF43Q68DV7 783 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 SCARA5Q6ZMJ2 495 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 ANKS1BQ7Z6G8 1248 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 ZBTB33Q86T24 672 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 TRABD2AQ86V40 505 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 PYROXD1Q8WU10 500 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 TTC25Q96NG3 672 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 DONSONQ9NYP3 566 aa10.04□□□□□ -0.8
SYNE2-213ENST00000554805 F8VP50 259 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 RPA3P35244 121 aaPredicted RBP10.03□□□□□ -0.8
SYNE2-213ENST00000554805 PSMC4P43686 418 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 MGAT5Q09328 741 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 MTMR2Q13614 643 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 ZACNQ401N2 412 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 CGB2Q6NT52 195 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 LVRNQ6Q4G3 990 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 LONP2Q86WA8 852 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 PALM2Q8IXS6 379 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 SAMD3Q8N6K7 520 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 ATG4CQ96DT6 458 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 RPAP3Q9H6T3 665 aaPredicted RBP10.03□□□□□ -0.8
SYNE2-213ENST00000554805 NPHS2Q9NP85 383 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 ARHGEF3Q9NR81 526 aa10.03□□□□□ -0.8
SYNE2-213ENST00000554805 UMODL1Q5DID0 1318 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms